Gene Plav_0804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0804 
Symbol 
ID5455450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp868765 
End bp870315 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content65% 
IMG OID640876373 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_001412084 
Protein GI154251260 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.48042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCAG CGGCAGTCAG GTCCGGCAAG CGGGTAGCGG AAATATCGGG CCTGGCGGAG 
CGGGCGGCGC GCGCCGCCAG CGGCTTTGCC AGCCTCGGCA TAGGCGCGGG CGATGTCGTC
GCGGTCTATC TACGGAACGA TTTTCCTTTC TTCGAGGCAT CCGCGGCGGC GGGTCTCGTA
GGCGCCTATT CGACACCCGT CAACTGGCAC AATTCGCCGG ACGAGGCGCG CTACATCTTC
GAGAATTCGG GCGCCAAGGC GATCGTCATC CATGCCGATC TCTGGCGTGG CATCGAAAAG
GCGCTGCCGA AGAACGTCCC CGTTTTCGTC GTCGAGACGC CGGCCGAAAT CGTCTCGGCC
TATGGTCTCT CCGCCGAAGC CGCGAAGCTC CCGGCCGGCA CGCAGGACTG GGGCCAATGG
CTCGCGCAGT TCCCGCCGAT CACCGCCGGC CCCGCCGAGG CGCCCGGCTC GATGATCTAC
ACATCCGGCA CCACCGGCCA TCCGAAGGGC GTGCGCCGCG CCGCGCCGAC GGCGGAACAG
GCCGCCGCCT GGGGCCAGGT CGTCGGCACC GTCATGGGTT TCAGCCCCGA ATATGGCGAG
CCGCAGAACA TGGTCACGGT CGTCACCGGC CCCATGTATC ACTCCGCGCC CAATGCCTAC
GGGCTCTTCG CCTTCCGCGT CGGCGCCAAT GTCATCCTGC AGCCCCGCTT CGATCCCGAA
GAATTGCTGC AGATGATCGA CACCTACAAG GTCACGCATC TCCACATGGT GCCCACCATG
TTCGTCCGCC TGCTGAAATT GCCCGATGAG GTAAAGAAAA AATACGACCT GTCGTCGCTG
CGCTTCGTCG TTCATGCGGC GGCGCCCTGC CCCGTTCACG TGAAGCAGGC CATGATCGCT
TGGTGGGGGC CCGTCATTAA TGAATATTAC GGCGGCACCG AAACGGGCGC GGTCGTCTTC
TGCAACTCCG AACAATATCT CAAGCATCCC GGCACCGTCG GCAAGGCGGT CCAGGGCGCG
AAGGTCATGG TGCTCGGCGA GAATGGCGAG GAGCTTGCAG CCGGTGCGAC AGGCGAAATC
GTCTGCCGCA TTCCCGCCAT TCCCGACTTC ACCTATCACG GCGACGACGA GAAGCGGCGC
AAGGCCGAAA AGGCCGGCCT CATCGCACTC GGCGATATCG GCTATCTCGA CGAAGACGGC
TTTCTCTATC TCTGCGACCG CGCCAAGGAC ATGGTGATCT CGGGCGGGGT CAACATCTAC
CCGGCCGAAA TCGAGGCCGA GCTTCACAAG ATGCCGGGCG TCGGCGATTG CGCGGTTTTC
GGCATCCCGG ACGAGGAGTT CGGGGAGTCG CTCTGCGCCG TCGTCCAGCA GCAGCCGGGC
GCCGGGCTTT CGGAAGCGGA CGTCAAAGCC TTTCTCCGAG AGCGGGTGGC CGGCTACAAG
GTGCCGAAGC GGGTCGAGTT TCAGAACGAT CTGCCGCGCG AGGATTCGGG CAAGATCTTC
AAGCGCAAGC TGCGCGAGCC CTATTGGCAG CAGGCGGGCC GCCAGATCTG A
 
Protein sequence
MGAAAVRSGK RVAEISGLAE RAARAASGFA SLGIGAGDVV AVYLRNDFPF FEASAAAGLV 
GAYSTPVNWH NSPDEARYIF ENSGAKAIVI HADLWRGIEK ALPKNVPVFV VETPAEIVSA
YGLSAEAAKL PAGTQDWGQW LAQFPPITAG PAEAPGSMIY TSGTTGHPKG VRRAAPTAEQ
AAAWGQVVGT VMGFSPEYGE PQNMVTVVTG PMYHSAPNAY GLFAFRVGAN VILQPRFDPE
ELLQMIDTYK VTHLHMVPTM FVRLLKLPDE VKKKYDLSSL RFVVHAAAPC PVHVKQAMIA
WWGPVINEYY GGTETGAVVF CNSEQYLKHP GTVGKAVQGA KVMVLGENGE ELAAGATGEI
VCRIPAIPDF TYHGDDEKRR KAEKAGLIAL GDIGYLDEDG FLYLCDRAKD MVISGGVNIY
PAEIEAELHK MPGVGDCAVF GIPDEEFGES LCAVVQQQPG AGLSEADVKA FLRERVAGYK
VPKRVEFQND LPREDSGKIF KRKLREPYWQ QAGRQI