Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0804 |
Symbol | |
ID | 5455450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 868765 |
End bp | 870315 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640876373 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_001412084 |
Protein GI | 154251260 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.48042 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCAG CGGCAGTCAG GTCCGGCAAG CGGGTAGCGG AAATATCGGG CCTGGCGGAG CGGGCGGCGC GCGCCGCCAG CGGCTTTGCC AGCCTCGGCA TAGGCGCGGG CGATGTCGTC GCGGTCTATC TACGGAACGA TTTTCCTTTC TTCGAGGCAT CCGCGGCGGC GGGTCTCGTA GGCGCCTATT CGACACCCGT CAACTGGCAC AATTCGCCGG ACGAGGCGCG CTACATCTTC GAGAATTCGG GCGCCAAGGC GATCGTCATC CATGCCGATC TCTGGCGTGG CATCGAAAAG GCGCTGCCGA AGAACGTCCC CGTTTTCGTC GTCGAGACGC CGGCCGAAAT CGTCTCGGCC TATGGTCTCT CCGCCGAAGC CGCGAAGCTC CCGGCCGGCA CGCAGGACTG GGGCCAATGG CTCGCGCAGT TCCCGCCGAT CACCGCCGGC CCCGCCGAGG CGCCCGGCTC GATGATCTAC ACATCCGGCA CCACCGGCCA TCCGAAGGGC GTGCGCCGCG CCGCGCCGAC GGCGGAACAG GCCGCCGCCT GGGGCCAGGT CGTCGGCACC GTCATGGGTT TCAGCCCCGA ATATGGCGAG CCGCAGAACA TGGTCACGGT CGTCACCGGC CCCATGTATC ACTCCGCGCC CAATGCCTAC GGGCTCTTCG CCTTCCGCGT CGGCGCCAAT GTCATCCTGC AGCCCCGCTT CGATCCCGAA GAATTGCTGC AGATGATCGA CACCTACAAG GTCACGCATC TCCACATGGT GCCCACCATG TTCGTCCGCC TGCTGAAATT GCCCGATGAG GTAAAGAAAA AATACGACCT GTCGTCGCTG CGCTTCGTCG TTCATGCGGC GGCGCCCTGC CCCGTTCACG TGAAGCAGGC CATGATCGCT TGGTGGGGGC CCGTCATTAA TGAATATTAC GGCGGCACCG AAACGGGCGC GGTCGTCTTC TGCAACTCCG AACAATATCT CAAGCATCCC GGCACCGTCG GCAAGGCGGT CCAGGGCGCG AAGGTCATGG TGCTCGGCGA GAATGGCGAG GAGCTTGCAG CCGGTGCGAC AGGCGAAATC GTCTGCCGCA TTCCCGCCAT TCCCGACTTC ACCTATCACG GCGACGACGA GAAGCGGCGC AAGGCCGAAA AGGCCGGCCT CATCGCACTC GGCGATATCG GCTATCTCGA CGAAGACGGC TTTCTCTATC TCTGCGACCG CGCCAAGGAC ATGGTGATCT CGGGCGGGGT CAACATCTAC CCGGCCGAAA TCGAGGCCGA GCTTCACAAG ATGCCGGGCG TCGGCGATTG CGCGGTTTTC GGCATCCCGG ACGAGGAGTT CGGGGAGTCG CTCTGCGCCG TCGTCCAGCA GCAGCCGGGC GCCGGGCTTT CGGAAGCGGA CGTCAAAGCC TTTCTCCGAG AGCGGGTGGC CGGCTACAAG GTGCCGAAGC GGGTCGAGTT TCAGAACGAT CTGCCGCGCG AGGATTCGGG CAAGATCTTC AAGCGCAAGC TGCGCGAGCC CTATTGGCAG CAGGCGGGCC GCCAGATCTG A
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Protein sequence | MGAAAVRSGK RVAEISGLAE RAARAASGFA SLGIGAGDVV AVYLRNDFPF FEASAAAGLV GAYSTPVNWH NSPDEARYIF ENSGAKAIVI HADLWRGIEK ALPKNVPVFV VETPAEIVSA YGLSAEAAKL PAGTQDWGQW LAQFPPITAG PAEAPGSMIY TSGTTGHPKG VRRAAPTAEQ AAAWGQVVGT VMGFSPEYGE PQNMVTVVTG PMYHSAPNAY GLFAFRVGAN VILQPRFDPE ELLQMIDTYK VTHLHMVPTM FVRLLKLPDE VKKKYDLSSL RFVVHAAAPC PVHVKQAMIA WWGPVINEYY GGTETGAVVF CNSEQYLKHP GTVGKAVQGA KVMVLGENGE ELAAGATGEI VCRIPAIPDF TYHGDDEKRR KAEKAGLIAL GDIGYLDEDG FLYLCDRAKD MVISGGVNIY PAEIEAELHK MPGVGDCAVF GIPDEEFGES LCAVVQQQPG AGLSEADVKA FLRERVAGYK VPKRVEFQND LPREDSGKIF KRKLREPYWQ QAGRQI
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