| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0786 |
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| Symbol | |
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| ID | 5455653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 852044 |
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| End bp | 852883 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640876355 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001412066 |
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| Protein GI | 154251242 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.268862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAG CCACCACTGG CGCAAGCCCG ACGCTGAAGG GCAACCTGAT GGCAGGCAAA
CGCGGCCTCG TTATGGGCGT TGCCAATAAC CGTTCCATCG CGTGGGGCAT TGCCAAAGCC
TGCGCCGATC AGGGCGCGGA GATCGCCTTT ACATATCAAG GCGAAGCTTT GCAGAAGCGG
GTTATTCCAC TTGCCGAGTC CGTCGGCTCA AAGTTGGTGA TGCCTTGCGA CGTCATGGAC
GCCGCCAGCA TGGACGCCGT CTTCGCTACG CTCGAAAAGG AATGGGGCAA GATCGACTTC
TTCGTTCACG CCATTGCCTA TTCGAACAAG GCCGAACTCG ACGGTCGCTA TGTCGATACG
ACCCTCGACA ACTTCACCGC TTCTCTCGCC ATCTCCTGCT ATTCCTTCGC GGCGCTTTGC
CAGCGCGCGG AAAAGCTGAT GCCTGATGGC GGCTCGATCC TCACCCTCAC CTATTACGGC
TCCGAGAAAG TTATCCCGCA CTACAACGTC ATGGGCGTCG CCAAGGCCGC GCTTGAGGCA
AGCGTGCGCT ATCTCGCGGT CGATCTTGGA CGCAACAATA TCCGCGTCAA CGCGGTGTCC
GCCGGGCCGA TCAAGACGCT CGCGGCATCC GGCATCGGCG ATTTCCGCTA CATCCTCAAG
TGGAACGAGC TCAATTCGCC GCTGAAACGC ACGGTAACGA TCGAAGAGGT CGGAAATTCG
GCGCTCTATC TGCTTTCGGA CCTTGGCGCG GGCGTGACCG GAGAAGTGCA CCATGTCGAT
GCCGGCTATC ACGTCGTCGG CATGAAGGCG GAAGATGCGC CGGATATGAG CATCGTCTGA
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| Protein sequence | MSEATTGASP TLKGNLMAGK RGLVMGVANN RSIAWGIAKA CADQGAEIAF TYQGEALQKR
VIPLAESVGS KLVMPCDVMD AASMDAVFAT LEKEWGKIDF FVHAIAYSNK AELDGRYVDT
TLDNFTASLA ISCYSFAALC QRAEKLMPDG GSILTLTYYG SEKVIPHYNV MGVAKAALEA
SVRYLAVDLG RNNIRVNAVS AGPIKTLAAS GIGDFRYILK WNELNSPLKR TVTIEEVGNS
ALYLLSDLGA GVTGEVHHVD AGYHVVGMKA EDAPDMSIV
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