| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0722 |
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| Symbol | |
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| ID | 5456608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 786235 |
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| End bp | 787254 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876291 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001412002 |
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| Protein GI | 154251178 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.197048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCGTTG TTGTACCCCT TGAGGACGAT CGCGGACGCG GACAGAACGC CGTCGCGCAG
CTTCAGGCAC TGGTCGCAAA GGAGATGCAG GCGGTCAATG AATTCATCCG TGAACGGATG
GCTTCGGATG TGCCCATGGT GCCCGAGCTT GCGAGCCATC TCATAAATTC GGGTGGCAAA
CGGCTTCGGC CGATGCTTAC CATCGCGGCT TCGCGGCTCT GCGGCTATAA TGGTACGGAC
CACATCAAGC TCGCCGCCAC CGTCGAATTC CTTCATACCG CGACACTCCT TCATGACGAT
GTCGTGGACG AGAGCGACAT GCGGCGCGGC GCGAAGACCG CCCGGATGCT CTGGGGCAAC
CAGGCAAGCG TCCTTGTCGG CGATTTTCTG TTGGGGCGCG CCTTCAAGCT TATGGTCGAA
ACGAAATCGC TGCGCGCGCT GGAAATCATC GCCGATGCCG CCTCGGTCAT CGCCGAGGGC
GAAGTGATGC AGCTTGCCGC CGCCAAGGAT ACCGGCACGA CGGAAGACGC CTATCTCCGC
GTCATCCAGG CGAAGACGGC GGCGCTGTTC GCCGCGGCAA CGGAGATCGG CGCGGTCATC
TCCGAGAAAA ACGGCAGCGA GGCAGCGGCG CTTGAATCCT ATGGCCGCAA TCTCGGTATC
GCATTCCAGC TTGTCGACGA TGCGCTCGAT TATGGCGGCC GCGCGGCTTC CCTCGGCAAG
AATGTCGGCG ACGATTTCCG CGAGGGCAAG ATCACGCTCC CCGTGGTGCT CGCCTTCCGG
CGCGGCAACG CGGAGGAGCG CGCCTTCTGG GAGCGCACGC TGCAACAGGG CGACCGGCAG
GAGGGCGACC TCGAACATGC CGTCGACCTG ATGAACAAGC ATGCCGCGCT GGAGGACACG
ATCCTGCGCG CGAGGCATTA CGGCGCCATC GCCAATGACG CGCTTGCGAT CTTCCCCGAC
AGCCCCTATC GCCAGGCGCT GACGGATCTC GTCGATTTCT GCATCAACAG GAATCACTAG
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| Protein sequence | MGVVVPLEDD RGRGQNAVAQ LQALVAKEMQ AVNEFIRERM ASDVPMVPEL ASHLINSGGK
RLRPMLTIAA SRLCGYNGTD HIKLAATVEF LHTATLLHDD VVDESDMRRG AKTARMLWGN
QASVLVGDFL LGRAFKLMVE TKSLRALEII ADAASVIAEG EVMQLAAAKD TGTTEDAYLR
VIQAKTAALF AAATEIGAVI SEKNGSEAAA LESYGRNLGI AFQLVDDALD YGGRAASLGK
NVGDDFREGK ITLPVVLAFR RGNAEERAFW ERTLQQGDRQ EGDLEHAVDL MNKHAALEDT
ILRARHYGAI ANDALAIFPD SPYRQALTDL VDFCINRNH
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