| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0686 |
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| Symbol | |
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| ID | 5454136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 747189 |
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| End bp | 748145 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876255 |
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| Product | hydroxymethylbutenyl pyrophosphate reductase |
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| Protein accession | YP_001411966 |
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| Protein GI | 154251142 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.242959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA CGATTTCAAA GCCCCCCCTG ACGCTGCTGC TGGCAAGCCC TCGCGGCTTC
TGCGCCGGTG TCGACCGGGC CATCCAGATC GTGGAACTCG CCATAGAAAA ATACGGCCCC
CCGGTCTATG TCCGCCACGA GATCGTGCAT AACCGCTATG TCGTGGAAGA GCTGGAGCGG
AAAGGCGCCA TCTTCGTGGA GGAGCTCGAC GAGGTGCCGT CCGGCGCGAA GGTGATCTTT
TCGGCTCATG GCGTGCCAAA GGCGGTTCCG GCGGACGCGC AATCGCGTGA GCTTTTTTAC
CTCGATGCCA CCTGCCCCCT CGTTTCCAAG GTCCATGTGG AGGCCGAGCG GCTGTATTCG
CGAGGCCACG AAATCCTGCT GATCGGTCAT GCCGGCCATC CGGAAGTGAT CGGCACGATG
GGTCAGCTGC CCGAGGGATC GGTCAGGTTG ATCGAAACGG CCGCCGATGC AGAGGCCTTT
CAGCCGCAAG ACCCGGAGAA AGTCGCCTTC GTCACGCAGA CGACCCTGTC GGTGGACGAC
ACGGCCGCCA TTGTTGCCAT CCTTCGCCGC CGCTTTCCCG CCATAGCGGG GCCGCGCAAG
GAGGACATCT GCTATGCCAC GACCAATCGT CAGGAAGCCG TGAAGGCGAT AGCGCCGCTG
GTCGACGCCA TGCTCGTCAT CGGGGCGCCA AATTCATCGA ACTCCATGCG GCTCGTCGAG
GTCGCCGAGC GCGCGGGCTG CCGCTATGCG GCGCTGCTGC AGCGCGCGAC CGATATCGAC
TGGGCGGCGC TCGGCTCCCC CGCCATCGTT GGCCTCACGG CCGGCGCCAG CGCGCCCGAA
GTCCTGGTTG AGGAAGTGAT CGATGCGTTC CGGCAGCGCT TCGAAGTGAC GGTTGAAGAA
AGCCCCGTGC GGCGCGAATC GGTACAGTTC AAGCTGCCGC GCGCGCTGGC CGGCTGA
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| Protein sequence | MSETISKPPL TLLLASPRGF CAGVDRAIQI VELAIEKYGP PVYVRHEIVH NRYVVEELER
KGAIFVEELD EVPSGAKVIF SAHGVPKAVP ADAQSRELFY LDATCPLVSK VHVEAERLYS
RGHEILLIGH AGHPEVIGTM GQLPEGSVRL IETAADAEAF QPQDPEKVAF VTQTTLSVDD
TAAIVAILRR RFPAIAGPRK EDICYATTNR QEAVKAIAPL VDAMLVIGAP NSSNSMRLVE
VAERAGCRYA ALLQRATDID WAALGSPAIV GLTAGASAPE VLVEEVIDAF RQRFEVTVEE
SPVRRESVQF KLPRALAG
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