Gene Plav_0684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0684 
Symbol 
ID5455596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp745763 
End bp746215 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content59% 
IMG OID640876253 
Productribonuclease H 
Protein accessionYP_001411964 
Protein GI154251140 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.746056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGTG AGGATATCGT CGAGATATAT ACAGACGGCG CCTGCTCGGG AAATCCCGGC 
CCGGGCGGCT GGGGCGTTTT GATGATCTAC AAGGATCGCG AGAAAGAGCT TTGCGGCGGC
GAACAGGCCA CCACCAATAA CCGCATGGAG CTGATGGCCG CCATCCAGGC GCTCGAGGCG
TTGAAGCGCG ACGCGCATGT CCGCATTCAC ACGGATTCCA ACTATGTGAA AGACGGCATC
ACCAAGTGGA TTCACGGCTG GAAAAAGAAC GGCTGGAAGA ATGCCGCCAA GCAGCCGGTC
AAGAATGCCG AACTCTGGCG GCGACTCGAA GCGGCAATCT CGACGCATCA GGTAAGCTGG
CACTGGGTAA AAGGCCATTC CGATCATCCG GAGAACGATC GCGCGGATGC GCTCGCCCGT
CAGGGCATGG CGCCCTATTT GCCGTCGAAA TAA
 
Protein sequence
MSGEDIVEIY TDGACSGNPG PGGWGVLMIY KDREKELCGG EQATTNNRME LMAAIQALEA 
LKRDAHVRIH TDSNYVKDGI TKWIHGWKKN GWKNAAKQPV KNAELWRRLE AAISTHQVSW
HWVKGHSDHP ENDRADALAR QGMAPYLPSK