| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0596 |
|---|
| Symbol | |
|---|
| ID | 5455477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 657676 |
|---|
| End bp | 659067 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640876165 |
|---|
| Product | cytochrome bd ubiquinol oxidase subunit I |
|---|
| Protein accession | YP_001411876 |
|---|
| Protein GI | 154251052 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.317837 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.23611 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCTC TGGACGCAGA AATTCTCGCC AGGCTTCAAT TCGCCTTCAC CATCGCTTTC
CATATCCTGT TTCCGACGCT GACCATCGGC CTCGGCGGCT TTCTCGTCTT CTTCGAGGCG
AAGTTCCTGC GCACGGGCGA TGAAGTCTGG TACCGGCTCT ATCGCTTCTG GGTGAAGATC
TTCGCGCTCA GTTTCGGCAT GGGCGTCGTC TCCGGCATCG TGCTTTCCTA TCAGCTCGGC
ACCAACTGGT CGGAATGGTC GCGCATCACG GGCCCCGTGC TCGGACCGTT GATCGGTTTC
GAGGTGCTCA CCGCTTTTTT CCTGGAAGCG GGCTTTCTCG GCATCATGCT GTTCGGCTGG
GACAAGGTGG GGCCCCGTCT CCACTTCCTC GCCACTTGCC TCGTCGCCAT CGGCACGGCG
ATTTCCGCCT TCTGGATTCT TTCCGCCAAT AGCTGGATGC AGACGCCGCA GGGCGCCACC
TTCATCGACG GCCATTTCGT GGTCGATAGC TGGCTCGCGG TCATCTTCAA CCCGTCCTTT
CCCTATCGCC TGATGCACAT GACAGCGGCG TCCTACCTGA CGACAAGCGT CGTCATCGCC
GGTGTCTCCG GTTTCTATCT GTTGCGAAAC CAGAATGCTG AAATCGCGCG GCCTGCCTTC
TCCACCGCTT TCTGGGCGCT GCTCGTGCTC GCGCCGCTGC AGATATTTCT CGGCGATCAG
CACGGCCTTA ACACGCTCGA ACATCAGCCG ATGAAGGTTG CGGCGATGGA GGGTAATTGG
GAGACGCAGT CTCACGCGCC TTTCCATATC TTCGCGATCC CGGACCAGAA GGCGCAGACC
AATCATCTGG AACTTTCCAT TCCCTTGGGT TCGAGCCTCA TCCTGAAGCA TAGTCCGTCG
GGCGTCGTGC CGGGGCTCAA CGAAGTGCCG ATCGAGGACC AGCCGCCTGT CGGCATCGTC
TTCTGGTCCT TCCGCGTCAT GGTCGGTATC GGCTTCCTGT TTCTCCTGCT CGGCCTATGG
GGCGTCTGGT CGCGCTGGCG CGGCACCCTT TTCGAGGACC GCTGGCTCCA GCGCCTAGCC
CTTGTCATGA CGCCTGCCGG TTTCATCGCC ACATTGGCCG GCTGGTTCGT CACGGAGGTC
GGCCGCCAGC CCTGGACGGT CTATGGCATG GTCCGGACCG CCGACAGCGT CTCGCCCACC
GTCACGGCAG AGGCCGTCGC GACGACGCTC GTCCTCTTCC TCATCGTCTA TGGCGGGCTT
TTCGGCGCCT ATCTCTATTA CCTCACGAAG CTTGTCCGCA AAGGCCCCGA TCCGCTTTCC
GTGGGCGAGG AAGGCGAGAA GCCCGAAGCG ATACGCGGCG CGCGGCCCGG CCTCGTCATT
CCGGCGGAAT AG
|
|---|
| Protein sequence | MPPLDAEILA RLQFAFTIAF HILFPTLTIG LGGFLVFFEA KFLRTGDEVW YRLYRFWVKI
FALSFGMGVV SGIVLSYQLG TNWSEWSRIT GPVLGPLIGF EVLTAFFLEA GFLGIMLFGW
DKVGPRLHFL ATCLVAIGTA ISAFWILSAN SWMQTPQGAT FIDGHFVVDS WLAVIFNPSF
PYRLMHMTAA SYLTTSVVIA GVSGFYLLRN QNAEIARPAF STAFWALLVL APLQIFLGDQ
HGLNTLEHQP MKVAAMEGNW ETQSHAPFHI FAIPDQKAQT NHLELSIPLG SSLILKHSPS
GVVPGLNEVP IEDQPPVGIV FWSFRVMVGI GFLFLLLGLW GVWSRWRGTL FEDRWLQRLA
LVMTPAGFIA TLAGWFVTEV GRQPWTVYGM VRTADSVSPT VTAEAVATTL VLFLIVYGGL
FGAYLYYLTK LVRKGPDPLS VGEEGEKPEA IRGARPGLVI PAE
|
|---|
| |