| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0552 |
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| Symbol | |
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| ID | 5455542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 600906 |
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| End bp | 602939 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876120 |
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| Product | AsmA family protein |
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| Protein accession | YP_001411832 |
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| Protein GI | 154251008 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.259696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCC TGATTGCGAT AATTGTCGGT CTCATTCTTG TTCTTGTCGC TGTCATCGTC
GCCGTGCCGA TGCTCATTCC GATGGAGACC TACAAAAATC AGGTCATTGC AACGGTTAAA
CAGCAGACAG GCCGGGATCT CCGCATAGAC GGCGACATCG GACTTTCCTT CTTCCCCAAT
ATCGCTGTCT CGCTCGAGAA TGTCGGCTTC TCGAATGCCT CATGGGCGCG CGAGCCCGAA
ATGGCCTCAA TGAAGGAAAT GCGGGCGGCG CTGAAGCTGA TGCCGCTTTT CAGTGGCAAT
ATAGAGATCG ACAGTTTCTC GCTGGTCGAT CCGGTCATCC ATCTTGAGGT GCGACGGGAC
GGAACGCCGA ACTGGCAATT CGAGGCAGCG CAGGCGGCCG CGCCCGAGAG CTCCGCTGCC
ACAGAAGACG GAGGCGGGTC TTCTCTTGGC GGCGTGCGCC TCGGCGACGT CTCCGTCAGG
AACGGAACCG CGACCTATCG CAATGCCCAG ACCGGCGCGA GCTATGCGGC GGAGCGTGTG
AACATGGACC TGGCGCTTCC GGGCCTCGAC GATCCGTTCA TCGCCAATGG CTCCCTTGTG
TGGAATGGCG ACGAAATCGG CATCGATCTG CGTGCGGATC GCCCGCGCGC GCTGACCGAA
GGCGGCGAAA CGCCCGTCGC GCTTACAATC TCGGCCCCCA AGGTCGATGC CTCCTACTCC
GGCACAGTGA AGCCGCTTGA TGGCCTGGCG TTCGCTGGTG AGGTCGACCT CAATGTGCCT
TCGGTGCGCG AGCTCGCCGC CTGGAGCGGC AGCCCGCTGC CCGCCGGCGA CGGCTTTGGC
GCACTTTCGG TCGAAGGCAA GGCAAGCGGC GGCGGCAACG AGTACCGGTT CTCCGATGCA
CGTGTCGGCT TTGACGGGAT GAACGCCACG GGCAATCTCA TCTTCCGCAC AGGCGGCGCG
CGCCCCTATG TCAAAGGCAA TCTTGCCGTC GATAAGATCG ATGTGAACAC CTATCTTGCC
GAAGGGAAGT CCGGCGGCGG TGGTGGCGGC GGTGGCGATG CAGGCGGAAG TGCCGGCGGG
GCAGACTGGA GCACTGAGCC AATCGACATG TCGGGCCTCA AGGCAATCGA TGCGGATTTT
GCATTCTCGA CCCAGCAGAT CCTTTTTCAA AAAATCACGA TTGGCGAAAG CGTGCTCAAC
CTCAAGCTCG CCAATGGCGT CCTCACGGCC AATCTCACCC AGCTCGATCT CTATGAGGGG
CGCGGCTCCG GCGTACTCAC ATTGAACGGA GCGGGGAATA CACCGCAGCT GAAGGCTGAC
TTCCGGTTGT CCGGCGTCGC CGCCGAACCG CTGCTGACCG ACGCGGCGGA TTTCTCCCGG
CTGCAGGGCA CCACCGCCGT CAATTTCTCT CTCGCCACTT CCGGCCGCAG CCAGCGGGAT
ATGGTCGCGG CGCTTGGCGG CAACGGCGCG GTGAAGTTCA CCAATGGCAA GATCAAGGGC
GTCAATCTCG CACAGCTTAC CCGCACCGTG CTGAGCGCGG CGACGAGCGG CTGGCAGGCC
GGCGGGACTC AGGATACAGA TTTTTCCGAA CTGGGCGGCA CCTTCACCAT CAGCAACGGC
GTGTTGAGCA ACAATGATCT GAAGCTGCTC TCGCCGCTTA TTCGCATATC GGGCGCGGGC
ACCGCGAATA TTCTTGAGAA GACTCTCAAC TACCGTGTCG AGCCTAAGAT CGCCGCTTCT
CTCGAAGGGC AAGGCGGCAA GACGGATGTC GCGGGCATCG AAGTGCCGAT CATCATTTCC
GGTCCATGGG CAAAACCGCG TTTTACGCCC GACCTCAAGT CCATGATTGA GAACCGCGAG
AATATCGGCA ACACGATCAA GTCGATCAAG GAAGACGGCG GCAAGTCGCT CCTTAAGGGC
CTGATGGGCG AGCCCGGAGG CGGCGCTCCG GCCGAAGGCG CCGATACCGG AGGATCACAA
GAAGAAACCA AGCCAAGCGC CGAGGATGCA TTGAAGCAGC TCTTCGGCCG CTAG
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| Protein sequence | MSRLIAIIVG LILVLVAVIV AVPMLIPMET YKNQVIATVK QQTGRDLRID GDIGLSFFPN
IAVSLENVGF SNASWAREPE MASMKEMRAA LKLMPLFSGN IEIDSFSLVD PVIHLEVRRD
GTPNWQFEAA QAAAPESSAA TEDGGGSSLG GVRLGDVSVR NGTATYRNAQ TGASYAAERV
NMDLALPGLD DPFIANGSLV WNGDEIGIDL RADRPRALTE GGETPVALTI SAPKVDASYS
GTVKPLDGLA FAGEVDLNVP SVRELAAWSG SPLPAGDGFG ALSVEGKASG GGNEYRFSDA
RVGFDGMNAT GNLIFRTGGA RPYVKGNLAV DKIDVNTYLA EGKSGGGGGG GGDAGGSAGG
ADWSTEPIDM SGLKAIDADF AFSTQQILFQ KITIGESVLN LKLANGVLTA NLTQLDLYEG
RGSGVLTLNG AGNTPQLKAD FRLSGVAAEP LLTDAADFSR LQGTTAVNFS LATSGRSQRD
MVAALGGNGA VKFTNGKIKG VNLAQLTRTV LSAATSGWQA GGTQDTDFSE LGGTFTISNG
VLSNNDLKLL SPLIRISGAG TANILEKTLN YRVEPKIAAS LEGQGGKTDV AGIEVPIIIS
GPWAKPRFTP DLKSMIENRE NIGNTIKSIK EDGGKSLLKG LMGEPGGGAP AEGADTGGSQ
EETKPSAEDA LKQLFGR
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