Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0546 |
Symbol | |
ID | 5455244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 595840 |
End bp | 598350 |
Gene Length | 2511 bp |
Protein Length | 836 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640876114 |
Product | malto-oligosyltrehalose synthase |
Protein accession | YP_001411826 |
Protein GI | 154251002 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3280] Maltooligosyl trehalose synthase |
TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCGC GCGCGACTTA TCGCATGCAG TTCCACAAGG ATTTCACCTT CGCCGATGCG GAGAAGCTGA TTCCCTATCT CGAGGATCTC GGGATCAGTC ATCTCTACAC CTCGCCCATC ACGACGGCGC GTGCCGGCTC GATGCATGGA TATGATGTCG TCGACCCGAC CCGTATCAAT CCGGAACTGG GCAGCGAGGA TGATTTTCGT GCCCTCTCGC TCGCCTTGCG CAAGCGTGGG CTCGGCATCG TGATAGACAT TGTGCCCAAC CACATGGGCT TCGCGGGCGG CGCAAATGCT TGGTGGCAGG ATGTTCTGGC TCACGGACGA AACAGCCGCT ACGCCCGTTT CTTCGATATA GACTGGCGGG AGAAGCTGCT GCTGCCGCTG CTCGGAGAGC CGTTTTCCGC CGCTCTCGAG AAGGGCGTTA TCGAACTTCG AGAAGAAGAC GGAGACTTCT TCTTTACTGC CTATGGCAAG AACCGCTTTC CTCTTAGGCC CGAAGATGCA TCGGAGCTGG CGGACGACGC TCATGCGGCG TTTGCTCTTT ACGATCCGAA GAGCGAAGCC GGACGGGACC GGCTGCGCAC GCTTCACGAC CGGCAGCATT ATCGTCTTGC TTCGTGGCGG ATTGCGAATG ACGAACTGAA CTGGCGCCGG TTTTTCACGA TCACGGGCCT GGCCGGCATT CGCATCGAAG ACCGGGAGGT GTTCGAAGAG ACACATGCGC TCTATTTCCG TCTCTACGGA GAAGGGCTGA TCGATGGCGT CCGTATAGAC CATGTCGACG GCCTTACAGA TCCGATCGGC TATTGCAGGA TGCTGAGGGA AAGGTTTGAG GGGATCGAAC GTCCGGCAGG GCTGGCGCGG GAGCCCGCCT ATATCGTCAT CGAGAAAATT CTCGGTGCGG ATGAAAAGCT TGGCAAGGAC TGGGCCGTCG ACGGCACGAG CGGTTACGAC TTCATGGCGG AGGTTGCGGC GGTTCTGCAT GCGCCCGAGG GGGAAGGGCC TCTCACTGCG CTATGGAGCG AAATGGGCGG CCGCCACAGC GATTTCGAAG CAGAGGAACT TCGCGCCCGG CAGGAAACGC TTTCCTGGCA GTTTGAAGGT CAGTTCAGCC GCTGCGTCGC GGCTTTTGCC ACGCTCGCCC GAACCACGCC CGAGGCGGAG GAGATCACCG CCGGGATGTT ACGCCGCGCC ATCGAGCGGC TTCTGTGGGT TTTTCCGGTC TACCGGACCT ATGGGACGGG AACCTCGGCA CCGGCAGGCG ATGAAGAAAT TCGTACCCTG GCACGAAAGC GCGTCGAGCC GTTTATCCCG CCGGGCGAAG GACAAGTTGT CGACATGGTG CTGGCGTGGC TGGCGGGTAC TGGACCCGGG GACACGGATT GTGCGGCGGA GGCAGTGCGG CGCTTCCAGC AATTATCCGT GCCAATTGCC GCCAAGGCGG TGGAGGACAC GGCCTTCTAT CGCTATGGAC GGCTGCTCTC GCGCAATGAT GTGGGATTCG ACGCGGGACA GTTCGCCTCG ACGGTCGGGG AGTTTCATGC GTCTGCGGCG CGGCGGGCCA GGGATTTTCC GCACGCGATG CTGGCAACCG CAACTCACGA CCACAAGCGC GGCGAAGACA TTCGCGCGCG GCTGGCTGTG CTGAGTGAAA TTCCGGAGGA ATGGCGCACG CGCGTGAGAG CCTGGCGCGA AATGAATGCA CCGCTGAGCC GCAATCTGGC GTCACCCGAT CTCTACATGC TCTACCAGAC ATTGTTCGGC GCCTGGCCGG TGGGGCTCAC CGCATCGGAC GCGCCCGGCC TGGCGGCTTT TTCAGCCCGG GTGACGGCGT GGCAGGTCAA GGCGCTGCGG GAGGCGGAGC GCCGGTCGGC GTGGGAAGAG CCCGACGAGA GCTACGAAGC CTCCTGCAGG GAGTTGGTCG AGGCCTTGCT CGATCCGGTA CGGTCGCGCG ATTTCCTCAC GGACCTGACC GATTTTGTGG CATGGACCGA ACCGGCAGCG CGCGCCAACA GCTTGGTGCA GGCCGCTCTT CACTACACGG TGCCCGGCGT ACCCGATCTC TATCAGGGGG CCGAACTGCC GGATTTGAGC CTGGTCGATC CCGATAATCG CCGTCCCGTC GACTATGCGG CACGCCGGGA GTTGATCGCG GGCGGCTCTA CAGGCATTCA GTGGGCAGAT GAGAAATTCG CGCTGATCGC GTCGCTTCTC GGCTATCGGC TGGAACATCC GGCACTGTTC GCGGGAGGCG ACTACAAGCC CGTGGTGGTA TCCGGCCTGC GGTCTGAGAA TGTTCTCGCC TTCCGCCGCA GGGGCGGAGG CAAGGAGCTC GTTTGCGCGG TCGCCCTCCG CTGTGCGAGT GCATTGGCCG GCAGAAAGAG CATTGCGGCG CCAGCCGAAT TCTGGGGCGA TACTGCGCTT GATCTGCCAC CGCCGGAGGC GCGCCGCGCC TCCGAATTGT TCAGGGAAGG CCCGGTCTTC CTGTCGATAC GTGATATCTG A
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Protein sequence | MSPRATYRMQ FHKDFTFADA EKLIPYLEDL GISHLYTSPI TTARAGSMHG YDVVDPTRIN PELGSEDDFR ALSLALRKRG LGIVIDIVPN HMGFAGGANA WWQDVLAHGR NSRYARFFDI DWREKLLLPL LGEPFSAALE KGVIELREED GDFFFTAYGK NRFPLRPEDA SELADDAHAA FALYDPKSEA GRDRLRTLHD RQHYRLASWR IANDELNWRR FFTITGLAGI RIEDREVFEE THALYFRLYG EGLIDGVRID HVDGLTDPIG YCRMLRERFE GIERPAGLAR EPAYIVIEKI LGADEKLGKD WAVDGTSGYD FMAEVAAVLH APEGEGPLTA LWSEMGGRHS DFEAEELRAR QETLSWQFEG QFSRCVAAFA TLARTTPEAE EITAGMLRRA IERLLWVFPV YRTYGTGTSA PAGDEEIRTL ARKRVEPFIP PGEGQVVDMV LAWLAGTGPG DTDCAAEAVR RFQQLSVPIA AKAVEDTAFY RYGRLLSRND VGFDAGQFAS TVGEFHASAA RRARDFPHAM LATATHDHKR GEDIRARLAV LSEIPEEWRT RVRAWREMNA PLSRNLASPD LYMLYQTLFG AWPVGLTASD APGLAAFSAR VTAWQVKALR EAERRSAWEE PDESYEASCR ELVEALLDPV RSRDFLTDLT DFVAWTEPAA RANSLVQAAL HYTVPGVPDL YQGAELPDLS LVDPDNRRPV DYAARRELIA GGSTGIQWAD EKFALIASLL GYRLEHPALF AGGDYKPVVV SGLRSENVLA FRRRGGGKEL VCAVALRCAS ALAGRKSIAA PAEFWGDTAL DLPPPEARRA SELFREGPVF LSIRDI
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