Gene Plav_0511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0511 
Symbol 
ID5455804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp551572 
End bp552351 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content69% 
IMG OID640876077 
ProductABC transporter related 
Protein accessionYP_001411791 
Protein GI154250967 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.470088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTCA CGATCGAAAA TCTCCACGCC TCCCTCGGCC AGACCCATGT CGTGCGCGGC 
GTCTCGCTCG AAGCGTCCGG CGCGCAATTC ATCGGCCTCA TCGGTCCGAA CGGCGTCGGC
AAGACGACGC TGGTCCGCGC CGCTGCCGCC CTCATTCCCT TCACCGGCAG CGTCGAGCTC
GACGGCGCCT CCGTCTCCTC GATGGAGCCG CGTGCCCGCG CCCGCGCCAT CGCCTATCTC
GCGCAAGGCG CCGGCAGTCA CTGGCCGCTC GAAGTCTCCC GCCTCGTCGC GCTCGGCCGC
CTGCCGCATC TGGCACCTTT CCGCGCGCCT GCGCCCGAAG ACGAAGCTGC CATTGCCCGC
GCCATGTCGC TCGCCGATGT CGAATGCTTC CGGGGCCGCG ATGTGCTCAC CCTCTCGGGC
GGTGAGCGCG CCCGCGTGCT GCTCGCCCGT GCGCTCGCCG TCGAAGCGCC GCTGCTGCTG
GTGGATGAGC CCGTCGCCTC GCTCGATCCC TATCACCAGA TCCGCATCAT GGAAGTCTTG
CGCGCTTATG CCGATGAGGG GCGCATGGTC GTCGCCGTCC TCCACGACCT CTCTCTCGCC
GCGCGCTATT GCGACCGCCT CATCCTGCTC GACGGCGGCA CCGTAAAAGC AGACGGGCGC
CCGGATGAAG TCCTGACGCC CGCCAATCTC GAGGAAACCT ATCGCATCCG TGCCCTCACG
GGCGGCGAGG GCCGGGAAAG CTACGTCCTC CCCATCGCCC GCACGGACTC GCTCGACTGA
 
Protein sequence
MRLTIENLHA SLGQTHVVRG VSLEASGAQF IGLIGPNGVG KTTLVRAAAA LIPFTGSVEL 
DGASVSSMEP RARARAIAYL AQGAGSHWPL EVSRLVALGR LPHLAPFRAP APEDEAAIAR
AMSLADVECF RGRDVLTLSG GERARVLLAR ALAVEAPLLL VDEPVASLDP YHQIRIMEVL
RAYADEGRMV VAVLHDLSLA ARYCDRLILL DGGTVKADGR PDEVLTPANL EETYRIRALT
GGEGRESYVL PIARTDSLD