Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0507 |
Symbol | |
ID | 5453417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 547625 |
End bp | 548641 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640876073 |
Product | exo-beta-1 3-glucanase-like protein |
Protein accession | YP_001411787 |
Protein GI | 154250963 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG5309] Exo-beta-1,3-glucanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.262128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCGGTG ACTGGAAATC GCCACATTGG CGGCCTAGCT ATGGGGCCAT GCGCTTCATT ATCGCTCTTC TCATGGCCAC TCTCACTGCC GCCCCTGCGC TGGCCGCTCC CGTCTGCGCA GAGCGCGACG ACGCGGCGCC CGCGCTCGCG CGGCTTCAGG ATGCGATGGC GGAAGGCCGC TTCATCGCCT ATCAGCCGAC CGACCTGAAA GTCTGGGATG GCAATCCCGT GCAGGCGAGC GAGGTCTCGA TCCGCCGCGA TCTTGAAACG CTTCGTCCCT GGTTCGACGG TCTCATCACC TATGGCGCCC ATAGCGGCGC CGAGCGCATT CCCGCCATCG CGAAGGATCT CGGCTATCGC GCAGTCGTCA TGGGCGTGTG GGACCCGGAG GACGATGTCG AACTCGCCAA CGCGCTTGCC GCCTGGAAGC AGCATCCGGA TATCGTCGTC GGCGTCTCCC TCGGCAACGA GATGGTCCTG AGCGGCCGCG CAAACTGGCG GGAGATGGAG CGCACCGTCG AGAATTTCCG CACAAAGGCG CCGGGTCTCC CGCTCTCGGT AACGGAGCCT TTCGCCCAGT TTCTCGACGG CGCCGAGGCC GCGCCGCTTC TCGCCCGGCT GGATTTCCTC GCGGTCAATG TCCATCCCGT TTTCGAGAAA TGGTTCGCCG ACGCACCGCC CTTCAACTGG GCGGATTTCG TGAAGCAGGT GACGTCCCGC CTCGCCGCGG AGCGTTTCTG CGGTCCGATC CTCGTCAAGG AGACGGGCGT GCCGACGGCG CCGGAAGCCG CAGGCTTCAC GCCTGAAAAG CAGAAACAGT TCTACGGCGA ACTCGCAAGG CAGATGCCGC CGTCGCGCAA TCTCGCCTTC GCGTATTTCT CGGCATTCGA TGCGCCCTGG CGCGTCTATG ACGAAAGCGC CGTCGCCGGC CATCATCCCG AGGAAGCCCA TTGGGGCCTC TTCAAGGAAG ACCGCACACC GAAACCGGTG ATGAAGGAAC TGCCGAAGCT CGATTAG
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Protein sequence | MSGDWKSPHW RPSYGAMRFI IALLMATLTA APALAAPVCA ERDDAAPALA RLQDAMAEGR FIAYQPTDLK VWDGNPVQAS EVSIRRDLET LRPWFDGLIT YGAHSGAERI PAIAKDLGYR AVVMGVWDPE DDVELANALA AWKQHPDIVV GVSLGNEMVL SGRANWREME RTVENFRTKA PGLPLSVTEP FAQFLDGAEA APLLARLDFL AVNVHPVFEK WFADAPPFNW ADFVKQVTSR LAAERFCGPI LVKETGVPTA PEAAGFTPEK QKQFYGELAR QMPPSRNLAF AYFSAFDAPW RVYDESAVAG HHPEEAHWGL FKEDRTPKPV MKELPKLD
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