| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0465 |
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| Symbol | |
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| ID | 5456435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 503087 |
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| End bp | 505339 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876031 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_001411745 |
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| Protein GI | 154250921 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCTT ACGAAAATTT CAAATTCGAA CTCGACGCAG ACGGCATCGC CCTCATCACC
TGGGACATGC CTGGCCGTTC GATGAACGTC CTCTCGCAAA GCTCGATGGC CGATATGGCC
TCGATCATCG AGAAGATCAT GTCGGACGAT GCCATCAAGG GCGCCGTCCT CACCTCCGGC
AAGGATGCCT TCTGCGCCGG CGCCGATCTC TCCATGATGG GCGGGCAGGC CGGCGGTTCG
GGCAGCGGCT CGCAGGAAGA TCGCGTCAAG GCGATGTATG AGGGCAACCT CAAATTCAAC
ATGCTGCTGC GCGGCCTCGA AACCTGCGGC AAGCCCGTGG TCGCCGCGAT CAACGGCACC
GCGCTTGGCG GCGGCCTCGA GGTCACGCTT GCCTGCCATT ACCGCATCGC CAGCGACAAT
CCGAAAACGC AGATCGGCCT GCCCGAAGCG AAGGTCGGCC TCCTGCCCGG CGGCGGCGGC
ACGCAGCGTC TGCCGCGTCT CATCGGCGCG CAGGCCGCCC TGCCGCTGAT CCTTCAGGGC
ACCTCGCTTG ATCCGCAAAA GGCGTTGAAG GCCGGCATCC TCCACAAGGT CGTGCCCGCC
GCCGAACTCA TCCCGGCCGC CAAGGCATGG CTGAAGGAAG GTCTCGCCCA GCCAAAGGTC
AAACTCGGCA AGAAGGGCCC CGAGGTTTAC GCCATCGCCA TCCAGCCCTG GGACCGCGAA
GGCTACAAGG TGCCCGGCGG TGACCCGAAC GGGAAAGGCG GAAGTCAGGT CTTCACCATC
GGCAATGCCA CGCTGCACAA GCAGACGCAT GGCAACTTCC CGGCGCAGAA GTTCATCATG
TCCTGCGTCT ATGAAGGACT CCAGGTGCCG ATCGAGGCGG GGCTCCGCAT CGAGACGCGC
TACTTCACCA AGCTGCTGAT GGACCCGCGT TCCAAGGCGA TGATCCGTTC GCTCTTCCTC
TCCATGCAGG AACTCGCCAA GGGCGCGCGC CGCCCGTCGG GCGTTCCCGC CTTCCAGGTG
AAGAAGCTCG GCATTCTCGG CGCGGGCATG ATGGGTGCGG GCATTGCTTA TGTCTCGGCC
CAGGCCGGCA TGGAAGTCGT GCTCCTCGAC ACCGATCAGG CGAATGCCGA AAAGGGAAAG
GCCTATTCGG AGAAACTTCT GAAGAAGGCG CTCGAACGCG GCAAGACCAC GCAGGAAAAA
GCGGATAAGC TGCTCGGCCT TATCAAGCCG ACGACGAATT ACGACGACCT CAAGGGCGCC
GACCTCGTCA TCGAAGCTGT GTTCGAAAGC CGCGACATCA AGGCGGAAGT GACGAAGAAG
GCCGAACCGA TGCTCGCTGC TGGCGGCATC TACGGTTCCA ACACCTCGAC GCTGCCGATC
ACCGGTCTCG CGGAAGCCTC CGCGAAGCCC GATAACTTCA TTGGCATCCA CTTCTTCTCG
CCCGTCGACA AGATGCAGCT TGTCGAAATC ATCATGGGCA AGAAGACGAG CGACGAAACC
CTCGCCAAGG CGATGGACTA CGTGAAGCAG ATCAGGAAAA CGCCGATCGT CGTCAACGAC
AGCCGCGGCT TCTACACCTC GCGCTGCTTC GGCACCTATG TCGGCGAAGG GCTCGCCATG
CTGGGCGAGG GCGTACCCCC CGCCATGATC GAGAATGTCG GCAAGATGAC CGGCATGCCG
ATGGCGCCGC TCGCCTTGAA CGACGAAGTC TCGCTCGATC TCGCCTACAA GGTGCGCGAG
CAGACGAAGA AGGACCTCGG CGACAAATAT GTCGGCTCGC CGGCAGACGA TCTCGTCAAG
AAGATGGTCG TGGACCTCGG CCGCGTCGGC AAGAAGGCGG GCAAGGGCTT CTACGACTAT
CCCGCAGACG GCAAGAAGAA GCTCTGGCCG GGCCTCGCAG ATCTCGCCGG TAAATCGCAA
GACCCCGACG ACCTCGATGT GCAGGAGCTG AAAAACCGCT TCCTCTACAT TCAGGCGCTC
GAAGCCGCGC GCTGCTTCGA GGAAGGCGTG GTGACCGACG TGCGCGATGC GGATGTCGGC
GCCATCCTCG GCTGGGGCTT CGCGCCCTGG GCCGGCGGCC CGCTCTCGCT GATCGACATG
GTCGGCACGA AAGAGTTTGT CGAAGCCTGC GACAAGCTTG CCCAGAAATA CGGGCCCCGC
TTCACGCCGG GCAAGCTCCT GCGCGACATG GCCGAAAAGG GCGACACCTT CTACGGCCGC
TTCGCACCGT CGAAGGAGAA GGCGGCCGCC TGA
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| Protein sequence | MTPYENFKFE LDADGIALIT WDMPGRSMNV LSQSSMADMA SIIEKIMSDD AIKGAVLTSG
KDAFCAGADL SMMGGQAGGS GSGSQEDRVK AMYEGNLKFN MLLRGLETCG KPVVAAINGT
ALGGGLEVTL ACHYRIASDN PKTQIGLPEA KVGLLPGGGG TQRLPRLIGA QAALPLILQG
TSLDPQKALK AGILHKVVPA AELIPAAKAW LKEGLAQPKV KLGKKGPEVY AIAIQPWDRE
GYKVPGGDPN GKGGSQVFTI GNATLHKQTH GNFPAQKFIM SCVYEGLQVP IEAGLRIETR
YFTKLLMDPR SKAMIRSLFL SMQELAKGAR RPSGVPAFQV KKLGILGAGM MGAGIAYVSA
QAGMEVVLLD TDQANAEKGK AYSEKLLKKA LERGKTTQEK ADKLLGLIKP TTNYDDLKGA
DLVIEAVFES RDIKAEVTKK AEPMLAAGGI YGSNTSTLPI TGLAEASAKP DNFIGIHFFS
PVDKMQLVEI IMGKKTSDET LAKAMDYVKQ IRKTPIVVND SRGFYTSRCF GTYVGEGLAM
LGEGVPPAMI ENVGKMTGMP MAPLALNDEV SLDLAYKVRE QTKKDLGDKY VGSPADDLVK
KMVVDLGRVG KKAGKGFYDY PADGKKKLWP GLADLAGKSQ DPDDLDVQEL KNRFLYIQAL
EAARCFEEGV VTDVRDADVG AILGWGFAPW AGGPLSLIDM VGTKEFVEAC DKLAQKYGPR
FTPGKLLRDM AEKGDTFYGR FAPSKEKAAA
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