| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0459 |
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| Symbol | |
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| ID | 5455694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 496312 |
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| End bp | 497394 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876025 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001411739 |
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| Protein GI | 154250915 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.141093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA GGGAATTTCT CGGCGTCGCC GCAGGCGCGA TCGCCATGCC GGCGATTGTG
ACCGCGGCGC GGGGCGACAA CGCCATCGAA TGGCGCATGG CAACGGCTTG GCCGAAGGGA
GCGCCGGGCG TCGGCGTCAA CGCGCAGCGT CTCGCGGACC GGATCGGCGC GATGTCCGGC
GGGCGCCTTA CGGTCAAGCT CTATGGGGCG GGCGAAATCG TGCCGCCTTT CGAAGTGTTC
GATGCCGTGT CTCAGGGCGT GTGCGAGATG GGGCACGGCA CGCCTTACTA CTGGCAGGGG
AAGAACCCGG TTTTCCACTA TTTCACGGGT GTGCCCTTCG GCCTCATGGC GCATGAAATG
GCCGGCTGGT TGCAATTCGG CGGCGGCCAG GCGCTGTGGG AGGAAGCCTA TGCGCCATTC
GGCGTGCTTC CCTTTTATGC CGGTTCGAGC GGTGTGCAGG CGGGCGGCTG GTTCAATCGC
GAGATCAAGA CGCTGGACGA TCTGAAGGGG CTCAAATTCC GCATTGCAGG GCTTGGCGGC
GAGGTGATGC GGCGGCTCGG CGCGAGCGTG GTACTGACAC CGCCCGGCGA AATATTCACC
TCGATGAAGA GCAAGACGAT CGATGCCGCC GAATGGGTGG GGCCGTGGAA CGACGTCGCC
TTCGGACTCC ACAAGGTCGC GCGATATTAC TACCTGCCTG CCTTTCATGA AGCGGGACCG
TCGCTCGAGC TCATCTTATC CCGGGAAAAA TTCGCGGCAC TGCCGGAAGA CCTGAAAGAG
GTCGTCCGAG GCGCGGCGCT GGCGAGCGCC GGTGAGACGC TTTCAGACTT CACGTTTCAC
AACATCGAGG CCTTTGCGGG GCTTGAGGCC GACGGAACAA CCGAGTTCCG GCAATGGCCG
GAGCCCGTCG CCGCGGCGAT GGCGAAGGTG TCGGGAGAGG TTCTGGCCGA GCTGGCGGCG
ACCAGCGATC TCGCCGGCCG GATCGCCGGC GCCTATGGCG ATTATCTGGC AAAGGCGCGG
GCCTGGTCCG AATGGAGCGA GGCGGCAATG CTGTCGCTGA GGAACCGGCA TCCGGCCGGG
TGA
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| Protein sequence | MKRREFLGVA AGAIAMPAIV TAARGDNAIE WRMATAWPKG APGVGVNAQR LADRIGAMSG
GRLTVKLYGA GEIVPPFEVF DAVSQGVCEM GHGTPYYWQG KNPVFHYFTG VPFGLMAHEM
AGWLQFGGGQ ALWEEAYAPF GVLPFYAGSS GVQAGGWFNR EIKTLDDLKG LKFRIAGLGG
EVMRRLGASV VLTPPGEIFT SMKSKTIDAA EWVGPWNDVA FGLHKVARYY YLPAFHEAGP
SLELILSREK FAALPEDLKE VVRGAALASA GETLSDFTFH NIEAFAGLEA DGTTEFRQWP
EPVAAAMAKV SGEVLAELAA TSDLAGRIAG AYGDYLAKAR AWSEWSEAAM LSLRNRHPAG
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