Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0448 |
Symbol | |
ID | 5455968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 481968 |
End bp | 482846 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640876014 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001411728 |
Protein GI | 154250904 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.122113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCGG GCATGGAAGA GGCGCGCTTC GGCGTGGCGC ATCTCGACAG GGTGGCATTG CATTACGCGG AGATGGGGCC GGAGGACGGG CCGCTCGTCA TTCTGCTGCA TGGCTTTCCC GACAGTTGCA TCGGCTGGCG GCACCAGATG CCGGCGCTGG CGAAGGCGGG GTTTCGCGTG ATCGCGCCGG ACCAGCGCGG CTATGGCGTG AGCGGGAAGC CGCGCGGCGT GAAGGCCTAT GATCTCGACG AGCTGGCGGA AGACATTGTG GCGCTGGCTA CGCATTTCGG CGAGACGCGG CTCCGCGTCG TCGGCCATGA CTGGGGCGCG GGCGTTGCCT GGTGGCTCTG TTCGACGCGG GGCGAGGCCA TGGAAAAGGC GGCGATGATC AACGCGCCGC ATCCCGCCAT CTGGAAAGAT GCGATGTACA AGGACAAGGC GCAGCGGAAG AAGAGCCGCT ATGTGAAGGC GTTTCGCCTG CGCGTGCTGC CGGAGATGAT GATAAGGCGG AAGAATTTCA GCGCGCTGGT GGAGGCGCTG AAGGGATCGG CGCGGCCGGG CGCCTTCGAC GAGGCCGAGT TCGACGCCTA TCGCAAGGCA TGGCGCGAGC CGAAGGCGAT CACCTCCATG GTGCATTGGT ACCGGGCGCT CCTGAAGAAG AAGCTGCCGG CGAAACCGGC GCCGATCGCG ACGCCGGTGC TGCTGATCTG GGGCGAGAAG GACGAGTTTG CCGATGTGTC GCTGGCGAAA CGCAGCATCG CGCTGTGCGA GCGCGGCGGC ACGCTGTTTT TCGCAGAGGG CACGCACTGG GTGCATCGCG AGGAGCCGCA GCCGATCAAC GACATGCTGA TTACCTTTCT GCGCTCCGAT CAGGAATAG
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Protein sequence | MISGMEEARF GVAHLDRVAL HYAEMGPEDG PLVILLHGFP DSCIGWRHQM PALAKAGFRV IAPDQRGYGV SGKPRGVKAY DLDELAEDIV ALATHFGETR LRVVGHDWGA GVAWWLCSTR GEAMEKAAMI NAPHPAIWKD AMYKDKAQRK KSRYVKAFRL RVLPEMMIRR KNFSALVEAL KGSARPGAFD EAEFDAYRKA WREPKAITSM VHWYRALLKK KLPAKPAPIA TPVLLIWGEK DEFADVSLAK RSIALCERGG TLFFAEGTHW VHREEPQPIN DMLITFLRSD QE
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