| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0409 |
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| Symbol | |
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| ID | 5455700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 441782 |
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| End bp | 442972 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640875974 |
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| Product | O-succinylhomoserine sulfhydrylase |
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| Protein accession | YP_001411689 |
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| Protein GI | 154250865 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.384656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA CGACACGCGA CGGCCGGAAG CTGCGGCCCC GGACAGAAGC CGTTCATGGC
GGCACGAACC GCACACCTTT CGGCGAGACG AGCGAGGCCA TGTTCCTCAC CTCGGGCTAT
GTCTACGAGA CGATGGAAGC CGCCGAGCGC CGCTTCAAGA ACGAGGAGCC GGGCTTCGTC
TATAGCCGCT TCTCCAATCC GACGGTGCGC AGCTTCGAGG AGCGGATGAT CGAGCTCGAA
GGCGCGGAAG ACGCGCGCGC AACCGCGACC GGCATGGCCG CCGTCACCTC CGCCATGCTT
TGCTACCTCA AGGCCGGCGA TCATGTTCTC TCCTCGCGCG CCCTGTTCGG CTCCTGCCGC
TACATCGTGG AGGATCTGCT GCCGCGTTTC GGCGTGACCT CGACGCTGGT CGACGGGCGC
GATCTCGACG CGTGGCGAAA CGCCGTGCAG CCGAACACAA AAGTGCTGTT CCTCGAAACG
CCGTCGAACC CGACGCTCGA AATCATCGAC ATCAAGGCCG TCGCCGAAAT CGCGCATGCG
GCGGGCGCGT TGCTCATGGT CGACAATGTG TTCGCCACGC CCGTCCTGCA GCGGCCGCTC
GAACTCGGCG CCGATGTCGT CATCTATTCG GCGACCAAAC ATATCGACGG GCAGGGCCGC
TGCCTTGGCG GCATCGTGCT CGCCGGCCAG CAATTCATCT CCGACCATCT CGCGAACTTC
CTGCGCCAGA CAGGGCCGAG CCTGAGCCCG TTCAACGCCT GGGTCATGCT GAAGAGCCTC
GAAACGCTCG ACCTGCGCGT GCGGGAGCAT GCGCGGAGCG CGGAGGCCGT TTCCCGTTTC
CTCGAAGGGC ACAAGGGCAC CGAGCGGGTT TTCTATCCGG GCCTGCCGAG CCATCCGCAG
CATAATCTCG CCATGAGCCA GATGGATGCA GGCGGCAACA TGGTCGCCTT CGAAGTGAAG
GGCGGCAAGG CGGGTGCCTT CCGCTTCGCC AATGCGCTTC AGGTCATCAA GATTTCCAAC
AATCTCGGCG ACGCGAAAAG CCTCATCACC CATCCCGCGA CCACCACCCA TCAGCGGCTC
ACACCGGAAG CAAGGGCGGA GCTGGGGATC GGCGAGGGCC TTGTCCGGCT GTCGGTCGGG
CTTGAGGATT CCGGCGATCT GATCGAGGAT CTGGACCGCG CGTTGTCCTG A
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| Protein sequence | MSKTTRDGRK LRPRTEAVHG GTNRTPFGET SEAMFLTSGY VYETMEAAER RFKNEEPGFV
YSRFSNPTVR SFEERMIELE GAEDARATAT GMAAVTSAML CYLKAGDHVL SSRALFGSCR
YIVEDLLPRF GVTSTLVDGR DLDAWRNAVQ PNTKVLFLET PSNPTLEIID IKAVAEIAHA
AGALLMVDNV FATPVLQRPL ELGADVVIYS ATKHIDGQGR CLGGIVLAGQ QFISDHLANF
LRQTGPSLSP FNAWVMLKSL ETLDLRVREH ARSAEAVSRF LEGHKGTERV FYPGLPSHPQ
HNLAMSQMDA GGNMVAFEVK GGKAGAFRFA NALQVIKISN NLGDAKSLIT HPATTTHQRL
TPEARAELGI GEGLVRLSVG LEDSGDLIED LDRALS
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