Gene Plav_0377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0377 
Symbol 
ID5456955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp402853 
End bp403533 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content63% 
IMG OID640875942 
Productputative hydroxylase 
Protein accessionYP_001411657 
Protein GI154250833 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.925919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTGG AAATCCCCGA TGTGCTGACA TCGGCGCAAC TGCGCCAGTG CCGCGAGGCG 
CTGGAAAAGG CGGCATGGCA GGATGGGCGC CAGACGGCGG GCCACATGGC CGCGCAGGCG
AAAAACAACC AGCAGCTCGC GCAGGACGAT CCCCTCTCGG TCGAACTTGG CGAATTCCTT
CTCGACCGCC TCGGCAAGAC CGATCGTTTC ATCGCCGCCG CCTTGCCGTT GAAGGTTCTG
CCGCCGCGTT TCAACCGCTA TAGCGGCGGC GGTAATTACG GCAATCACGT CGATGCGGCA
ATTTTCAGCG TCCCCGGCAC GCCGCACCGG ATCAGGTCCG ATATTTCCGC CACGCTCTTT
TTCAGTGAGC CTGATGAATA TGAAGGCGGC GAGCTGATCG TCGAGGACAC TTATGGCAGC
CACGCGATCA AGCTGCCTGC GGGCCATATG GTCCTCTATC CCGGCACGAG CCTCCACCGT
GTTGCGCCGG TCACGAAGGG CGTGCGTCTC GCTTCCTTCT TCTGGGTGCA AAGCCTCGTG
CGTGAAGACA GCCAGCGCGC CATGCTCTGG GAGCTCGATG GCGCGATCCA GCGCGTCACG
CTCGACACAC CGGAAAGCCC CGCCCTGCCG CAGCTCATGG CGCTCTACCA CAATCTCCTG
CGGCGCTGGT CGAACACATG A
 
Protein sequence
MMLEIPDVLT SAQLRQCREA LEKAAWQDGR QTAGHMAAQA KNNQQLAQDD PLSVELGEFL 
LDRLGKTDRF IAAALPLKVL PPRFNRYSGG GNYGNHVDAA IFSVPGTPHR IRSDISATLF
FSEPDEYEGG ELIVEDTYGS HAIKLPAGHM VLYPGTSLHR VAPVTKGVRL ASFFWVQSLV
REDSQRAMLW ELDGAIQRVT LDTPESPALP QLMALYHNLL RRWSNT