| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0374 |
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| Symbol | |
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| ID | 5453960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 398717 |
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| End bp | 399142 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640875939 |
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| Product | TonB system transport protein ExbD type-1 |
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| Protein accession | YP_001411654 |
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| Protein GI | 154250830 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGTCC GTCTCGATCA CGGCGACGAC GACCTCGCCG AAACGCATGA AATCAACGTC
ACGCCGTTCA TCGACGTGAT CCTCGTCCTG CTCATCATCT TCATGATCGC GGCACCGCTG
GCGACCGTCG ACATTCCGGT TGACCTGCCG GCGGCGAATG CGGAGCCGCA GCCGCGCCCG
ACCGAGCCGA TATTCCTCTC GGTGAAGTCC GATCTCAGCG TGGCGCTGGG CGAGGAAACG
GTGCCGCCGG GCAGCCTCGG CGCCGCGCTC GACGCGCAGA CGCAGGGCGA CCGCGAGCAG
CGCGTGTTTC TCCGCGCCGA CAAGAGCGTT GGTTATGGCG ACCTGATGCA GGTGATGAAC
GATCTTCGCG CCGCCGGTTA TCTCAAGATC GCACTTGTGG GGCTCGACGC TTCGGAAGCG
CCATGA
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| Protein sequence | MAVRLDHGDD DLAETHEINV TPFIDVILVL LIIFMIAAPL ATVDIPVDLP AANAEPQPRP
TEPIFLSVKS DLSVALGEET VPPGSLGAAL DAQTQGDREQ RVFLRADKSV GYGDLMQVMN
DLRAAGYLKI ALVGLDASEA P
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