| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0371 |
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| Symbol | |
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| ID | 5455536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 396162 |
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| End bp | 396899 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640875936 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001411651 |
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| Protein GI | 154250827 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.5049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGATC TGGATTTCTC GGGCAAAACG GCGCTCGTCG TTGGCGGCTC CAGCGGCATC
GGCAATGGCA TCGCCCACGC CTATCGGACG CGCGGCGCCG AAGTGCATGT ATGGGGTACG
AGGCAATCCG CGAAGGATTA CGAAGGCAGC GAAGGGTCGG ACATGACCGG CCTCCATTAT
GCCCATATGG ACGTGGCCGA TTTCGATGCC ATCGAAGCAT ATCGGCCGCC CTTCGCGAAG
CTCGACATTC TTGTGCTTTG CCAGGGCACG GTCATCTACA AGCGCGGCGA ATTCAAGATG
GATGGCTTTC AGAAGGTGAT GGACGTCAAC CTCAACAGCC TCATGGCCTG CGCGATAAAA
TTCCACGACA TGCTCGCCGC CGCGAAAGGC GCGTTGATTA CCGTCAGCTC CACGGCCGGC
TTCCATGCGA CGCGCGGCAA TCCCGCCTAC AACGCCTCGA AGACGGGCGC CGTCGGCCTC
ACGCGCACGC TGGGCGAGGC ATGGGCGACG GATGGCATCC GCGTGAACGG CATCGCCCCC
GGCCTCGTGG ATACCAAGCT CACCAAGGTG ACGACTGAAG ACCCGAAGCG CCGCGAAATG
GCAATCCGCG GCATTCCCGC CGGCCGCCTC GGCACGCCGG AGGACATGGC GGGTGCGGCG
CTCTTTCTTG CCTCGCCGCT TTCTTCCTAT ATTTACGGAC AGACGCTCAT CGTCGATGGC
GGCCTCATCC TTTCCTGA
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| Protein sequence | MKDLDFSGKT ALVVGGSSGI GNGIAHAYRT RGAEVHVWGT RQSAKDYEGS EGSDMTGLHY
AHMDVADFDA IEAYRPPFAK LDILVLCQGT VIYKRGEFKM DGFQKVMDVN LNSLMACAIK
FHDMLAAAKG ALITVSSTAG FHATRGNPAY NASKTGAVGL TRTLGEAWAT DGIRVNGIAP
GLVDTKLTKV TTEDPKRREM AIRGIPAGRL GTPEDMAGAA LFLASPLSSY IYGQTLIVDG
GLILS
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