| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0355 |
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| Symbol | |
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| ID | 5453706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 377047 |
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| End bp | 380181 |
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| Gene Length | 3135 bp |
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| Protein Length | 1044 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640875920 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001411635 |
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| Protein GI | 154250811 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCGG GCATCATCGG CTGGTCGGCG CGCAACAGCG TTCTGGTGCT GATCGGTACG
CTCTTTGCGA TCGTCGCCGG CATCTATTCG ATTGCGCACA TTCCGCTCGA TGCGATACCG
GACCTGTCGG ACACGCAGGT CATCATCGTC ACCGATTATC CCGGCCAGGC GCCGCAGGTC
GTCGAGGACC AGGTGACCTT TCCGCTCACA ACCGCAATGC TCAACGTACC GCGCTCCCGT
GTCGTGCGCG GCTTTTCCTT CTTCGGCGTT TCCTTCGTCT ATGTCGTCTT CGAGGACGGC
GCCGATCTCT ACTGGGCGCG AAGCCGTGTC CTCGAATATC TGAGCGCGGC GGCGGAACGC
CTGCCCGACG GCGTGACGCC CTCGCTCGGG CCGGACGCGA CCGGCGTCGG CTGGGTCTAT
CAATATGCGT TGAAATCCTC GGAGCTGAAC CTCGCCGAAC TCCGTTCGCT GCAGGACTGG
CAGGTTCGCT TCGCCGTCTC GCGCGCCGAC GGCGTCGCCG AAGTCGCAAC GGTGGGCGGC
TTCGTCCGGC AATATGCGAT CATCGTCGAT CCGTTGCTGC TGAAAAGCAC GGGGCTGACG
CTGGCCGATA TCGCCGCTGC GGTACGCACC AGCAACATGG ATGTCGGCGG CCGCACCATC
GAGCTTGCCG AAACCGAATT CATGATCCGC GGCCGCGGCT ATCTCGCCGG CATCGAGGAC
ATCGAGAAGA TCGTGCTCCG CGCCGAGGGC GGCACGCCGC TTCTGTTGCG CGACGTGGCG
CGCGTCGAAC TCGCACCCGA CGAGCGGCGC GGCGTCGCCG AAATGGGCGG CGAGGGCGAG
GCGGTTTCCG GCATCGCCCT GCAGCGCCAT GGCGCCAATG CGCTCGACGT CATCGAAAAC
GTCAAACGGG AGCTTGCGGC CGTTGCGCCG AGCCTGCCCG GCAACACCGA AATCGTCGAG
GTCTATGACC GTTCGGCGCT GATCGGCCGC GCCATCGACA CGCTGGTGCG CACGCTCGTC
GAGGAAAGCA TCGTCGTGGC GCTGGTCTGT TTTCTCTTTC TCTGGCACGC GCGCAGCGCG
CTTGTCGCCA TCGTCACGCT GCCGGTCGGC ATTCTGATGG CGCTTGCCGC CACCCATGTG
CTCGGCATCC CCTCCAACAT CATGAGCCTC GGCGGCATCG CGATCGCGAT CGGCGCCATG
GTCGATGCGG CGATCGTGAT GATCGAAAAC GCCCACAAGC GACTCGAACA TGCGCCGCCC
GGCGCCTCGC GCACCGCCGT CGTCATCGAG GCGGCGCAGG AAGTGGGCCC GGCACTCTTT
TTCAGCCTGC TGATCATCAC CGTCTCCTTC CTGCCGATCT TCACGCTGGA GGCGCAGGAA
GGCCGCCTTT TCAAGCCGCT CGCCGCCACC AAGACCTTCG CGATGGCGGC AGCCGCCCTT
CTCTCGATCA CGCTGGTGCC GGTGTTGATG ACGCTCTTCA TCCGCGGCCG GATCGTGCCG
GAGGCCGAAA ATCCGCTCAA CAAGGCGCTG ATCTGGCTCT ACCGGCCGGT GATCCGGCTG
GTGCTGCGCG CCCGCGGCGC CACCATCCTC GCTGCCGTCG TCGTGCTCGC CGTCACGGTG
GTGCCGCTCA GCCGCATCGG CTCGGAATTC ATGCCGAACC TCAACGAGGG AACGCTCCTC
TACATGCCGA CGACGCTGCC GGGCCTTTCG GTGACGAAGG CGGCCGAACT TCTGCAGACA
CAGGACCGGA TCATCGCCTC CTTTCCCGAG GTCGCCTCGG TCTGGGGCAA GGCGGGCCGC
GCCGACAGCG CGACCGACCC CGCGCCGATG GAAATGTTCG AGACCATCAT CAACCTGAAG
CCCGAAAGCG ACTGGCGGCC GGGCATGAAC CTCGACAGGC TGATTGCCGA AATGGACACC
GCGCTCCAGT TTCCGGGCGT CTCCAATGCC TGGACCATGC CCATCAAGGC CCGCATCGAC
ATGCTCTCGA CCGGCATCCG CACGCCGGTC GGCGTCAAGA TCTTCGGGCC CGATCTCGTC
GAGCTCGAAC GGATCGCCCG CGAAATCGAA GCCACCCTGC GCGCCGTTCC CGGCACCTCG
TCGGCCTATG CCGAGCGCGT CAATGGCGGC TATTTCCTTG ACATCAAGCC CGACCGCGAC
CGCATCGCCC GGCACGGCCT CTCGATGGAG ACGGTACAGG AGACGATCGC GATGGCGCTG
GGCGCGAAAG CTCTCACCAC CACGGTCGAG GGGCGCGAGC GCTATGACGT GGTGCTGCGC
TATCCCCAGG CCTCCCGCGT CGATCCGGAC GCGATCGCGC GCGAGGTTTT CGTCACGACG
CCCGCCGGCG CCGCAGTGCC GCTCGGCGAG ATCGCCGACA TCGCGCGGGC GCGCGGCCCC
ACCATGGTGC GCACCGAAAG CGGCCAGCCG GTCGTCTATG TTTTTGTCGA TATCCGCGAC
CGCGATCTCG GCGGCTATGT CGGCGAGGCG CGGCGCGTGG TCGCAAGCGA AGTCGCGCTG
CCGCCCGGCT ACACGGTGGC CTGGAGCGGC CAGTTCGAAT ATCTGGCCCG CGCGCAGCAG
CGTCTTGCCG TCGTCATCCC GGTCACGCTG CTGGTGATCT TCCTGCTCCT CTATCTCAAC
TTCAAAGGCC TGACCGAGAC CTTCATCGTG ATGTTGTCGC TGCCCTTCGC GCTGGTCGGC
GGGCTCTGGT TGATGGCGGC GCTCGATTTC AACATGAGCG TCGCTGCCGC CGTCGGCTTC
ATCGCGCTGG CGGGCGTCGC TGCCGAAACC GGCGTCGTGA TGCTGCTCTA TCTCGACCAC
GCGCTTCGCG ACGCGAAGGC GCTCGCCGCG GCCGAGGGCC GCGCCTTCAC CCGCGCCGAT
CTCAACGGCG CGATCATGGA GGGCGCCGTC GGGCGCGTGC GGCCGAAAAT GATGACGGTC
ATCACCATCA TGGCGGGCCT GCTGCCGATC CTCTGGGCGA CCGGCACCGG CGCCGAGGTG
ATGCAGCGCA TCGCCGTGCC GATGATCGGC GGCATGGTGT CCTCCACCAT CCTCACCCTC
GTCGTGATCC CGGCGATCTA CGCGATCGTC CACGGCATGG GGCTATTGAA AGGCGATGCC
GGCACTGCCG GTTGA
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| Protein sequence | MIAGIIGWSA RNSVLVLIGT LFAIVAGIYS IAHIPLDAIP DLSDTQVIIV TDYPGQAPQV
VEDQVTFPLT TAMLNVPRSR VVRGFSFFGV SFVYVVFEDG ADLYWARSRV LEYLSAAAER
LPDGVTPSLG PDATGVGWVY QYALKSSELN LAELRSLQDW QVRFAVSRAD GVAEVATVGG
FVRQYAIIVD PLLLKSTGLT LADIAAAVRT SNMDVGGRTI ELAETEFMIR GRGYLAGIED
IEKIVLRAEG GTPLLLRDVA RVELAPDERR GVAEMGGEGE AVSGIALQRH GANALDVIEN
VKRELAAVAP SLPGNTEIVE VYDRSALIGR AIDTLVRTLV EESIVVALVC FLFLWHARSA
LVAIVTLPVG ILMALAATHV LGIPSNIMSL GGIAIAIGAM VDAAIVMIEN AHKRLEHAPP
GASRTAVVIE AAQEVGPALF FSLLIITVSF LPIFTLEAQE GRLFKPLAAT KTFAMAAAAL
LSITLVPVLM TLFIRGRIVP EAENPLNKAL IWLYRPVIRL VLRARGATIL AAVVVLAVTV
VPLSRIGSEF MPNLNEGTLL YMPTTLPGLS VTKAAELLQT QDRIIASFPE VASVWGKAGR
ADSATDPAPM EMFETIINLK PESDWRPGMN LDRLIAEMDT ALQFPGVSNA WTMPIKARID
MLSTGIRTPV GVKIFGPDLV ELERIAREIE ATLRAVPGTS SAYAERVNGG YFLDIKPDRD
RIARHGLSME TVQETIAMAL GAKALTTTVE GRERYDVVLR YPQASRVDPD AIAREVFVTT
PAGAAVPLGE IADIARARGP TMVRTESGQP VVYVFVDIRD RDLGGYVGEA RRVVASEVAL
PPGYTVAWSG QFEYLARAQQ RLAVVIPVTL LVIFLLLYLN FKGLTETFIV MLSLPFALVG
GLWLMAALDF NMSVAAAVGF IALAGVAAET GVVMLLYLDH ALRDAKALAA AEGRAFTRAD
LNGAIMEGAV GRVRPKMMTV ITIMAGLLPI LWATGTGAEV MQRIAVPMIG GMVSSTILTL
VVIPAIYAIV HGMGLLKGDA GTAG
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