| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0351 |
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| Symbol | |
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| ID | 5455318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 372865 |
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| End bp | 374283 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640875916 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001411631 |
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| Protein GI | 154250807 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.766684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.755187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCGG TCGAAACACG GCCGGCAAGC GAGCCTGCCG CTAACAAAAG AAGGCGTCAC
ATGTTTGCTC TGACTTCGCT GGGCGGCGCG GGCACCGTTA CGGGCTCCAA ACATCTGCTG
ACGCTGGACG GTCACCGCAT CCTCATCGAT TGCGGCCTGT TCCAGGGGTT GAAGAACCTG
CGCGAGCTCA ACTGGGCGCC GTTCCCGGTC GATCCCCGCT CGATCGATGC GATTGTGCTC
ACCCACGCCC ATCTCGATCA TTCGGGCTAT CTGCCGAAGA TCGTCCGCGA GGGCTTTCGC
GGCCGCGTCT TCGCAACGGA CACAACGTGC AATGTGGCAG CGCTCATTCT GAAGGACAGC
GGCTACATCC AGGAGAAGGA CGCCGATTAC GCCAACCGGA AGTCCTATTC GAAGCACAAG
CCGGCATTGC CTCTTTACGG CGTTCGCGAC GCCGAGCGCG CGGTCGAGGC CTTTACCGCC
GTTCCGTATC ACAAAACCGT TTCGCTTCCC GGCGGCGCCA CGCTGACCTT CCGCCATGCC
GGCCACATCC TCGGTGCCGC TACGGCAGAA ATCGGTTGGG GCGGGAAGAA AATCCTTTTT
TCGGGCGATC TCGGCCGCTA TGGCGATCCG GTGATGGTCG ACCCCGAAAC TGTCTCGAAG
GCCGATTATG TGGTGGTTGA ATCGACTTAC GGAAACCGCA GCCACGACAC GGCCGACCCG
GTCGAACAAC TCGGAGCCGT GATCGAGAAG ACGGTGGCGC GAGGCGGCAC GGTGGTGATC
CCTGCCTTTG CGGTCGGCCG GGCCCAGTCG CTTCTGTATT ACATTTGGGC CCTCAAACAG
GCTGGCCGCA TCCGGGATGT GCCGGTCTAT CTCGACAGCC CGATGGCGAT CAATGCGAGC
GAACTCCTTT GCGCCCATCT CGACGACCAC CGCCTGTCGC CGCCTCTGTG CAAACAGGTC
TGCGACATTG CGACCTATGT GCGCGAGGTT GAAGACTCGA AGGAAATCAC CGCCAATGCC
CATCCAAAGA TTATCATCTC GGCGAGCGGC ATGGCGACCG GCGGCCGTGT CCTGCATCAC
ATGAAATCCT TTGCGCCGGA CCGCAAACAC ACAATCCTCT TTTCCGGTTT TCAGGCCGCC
GGCACGCGCG GACGCGCCAT GCTGCAGGGT GCCCGCGAAA CGAAGATCCA TGGGCAGTGG
GTGCCGGTCC GCGCCGAAAT TGCAGAATTG CCAATGTTGT CGGCTCATGC CGACGGCGAT
GAAATCATGC GCTGGCTCTC AGCCCTCCGC CGCCCGCCGC AACAGACCTT CGTCGTTCAT
GGCGAGCCCG ATGCCTCCGA AGCCCTGCGC GTCCGCATCG GCCGGGAACT TGGCTGGCAT
GTCGCCGTTC CCCGCCAGGA CCAGGTCTTC ACGCTGTGA
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| Protein sequence | MTPVETRPAS EPAANKRRRH MFALTSLGGA GTVTGSKHLL TLDGHRILID CGLFQGLKNL
RELNWAPFPV DPRSIDAIVL THAHLDHSGY LPKIVREGFR GRVFATDTTC NVAALILKDS
GYIQEKDADY ANRKSYSKHK PALPLYGVRD AERAVEAFTA VPYHKTVSLP GGATLTFRHA
GHILGAATAE IGWGGKKILF SGDLGRYGDP VMVDPETVSK ADYVVVESTY GNRSHDTADP
VEQLGAVIEK TVARGGTVVI PAFAVGRAQS LLYYIWALKQ AGRIRDVPVY LDSPMAINAS
ELLCAHLDDH RLSPPLCKQV CDIATYVREV EDSKEITANA HPKIIISASG MATGGRVLHH
MKSFAPDRKH TILFSGFQAA GTRGRAMLQG ARETKIHGQW VPVRAEIAEL PMLSAHADGD
EIMRWLSALR RPPQQTFVVH GEPDASEALR VRIGRELGWH VAVPRQDQVF TL
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