Gene Plav_0327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0327 
Symbol 
ID5456991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp352118 
End bp353287 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content56% 
IMG OID640875892 
Productphosphoglycerate mutase 
Protein accessionYP_001411607 
Protein GI154250783 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCGC CAACGGGCTG TCTCCCGGTC TTGCTGAGCG CCTCGGCGGT GGCGTTCGGC 
GACAACACAT CGAAGCGGCC CGTCGAGTGC AGCCGTTCGG TCAGTTGTAT CTCGCGAACG
CCATTTTGCC AGACGGCAAT CCGACGAACC TCCGGCGTGA GGGGCGTTGT GGAGCCGCCC
GTCTCGAATG CCACTTCGGC GGTGCCACCG GTCGTTGTCT GGAAGGTTTT GTATCCCTGG
AAGCCGCTAA CGGCAGCCAT GCCGACGGTC ATCGGGATCA AAGCCGCGGC GCATCCGCTG
AGAAGGAGGG AAGCCGCCGT CGCGATCACA AGAGAGGGAA GCGGCCTTCC CCTTGTCCGG
TATCCTTCAG CCCCACCGGC CCGAACTGTG TCGGAATCCT CACAGGTGCC CACCCATCCA
CGCATCGAAA CCCCCCGATT GAACAGAATG AGCAATTCTG TTCAGCCAGC CGTCGGGACC
TATAGAAGCC GATCCACTGC TACGCCCGTG ATGTTGAATC TGGATCTTCT GTGTTATGAT
TACTTATACG TGTTGAATGA AAAAGTAATA CTTCTGGCGC GGCACGGGAC AACACACTGG
ACACAAGAAG GGCTTTACAA TTCGCATACA GATGTACCTC TTATTCCAGC CGGAAGAGAC
GAAATATTGC GGGCTGCCCA TACGGTCATA GGCCGCAATG TGAAAAACAT TCTCTGCTCA
CCGTTGCGAA GAACACGAGA AAGCGCCGCG ATATTTTCCG ATACATTGGG GGTGGCGGTG
GAAACTGACG AGCGACTCCG AGAGCTCAAC TTCGGGCTAT TTGAAGGCCA AACGCGTCGT
GACCTGTCCG CTCCTCCATT TGCAGACGAA TTTTTCCGCT GGACCGACGA AACAGTTCCG
TACTCTCCCC CAGGAGTAGA AAGCTTCTCC ACGGCCAAAG AGCGTATCGT TGATTTTATT
CGGGATACCA TCGAAATTCC GGGCCCGACC CTTGTTGTGT CGCATGGTGT GATTCTGAGA
ATTCTACTCT GCGTGTGCGT TCTTGGGATA GAGCCGCATC ATTTCCGTAG GCTGCAGATA
GACGTCGGTA GCATTTCTGA AATCCGTCTA GATCGGTCCC GGTTACAACT CTGGACTCTA
AACACTACGA CGCCTCGCGA CCTTACATGA
 
Protein sequence
MRPPTGCLPV LLSASAVAFG DNTSKRPVEC SRSVSCISRT PFCQTAIRRT SGVRGVVEPP 
VSNATSAVPP VVVWKVLYPW KPLTAAMPTV IGIKAAAHPL RRREAAVAIT REGSGLPLVR
YPSAPPARTV SESSQVPTHP RIETPRLNRM SNSVQPAVGT YRSRSTATPV MLNLDLLCYD
YLYVLNEKVI LLARHGTTHW TQEGLYNSHT DVPLIPAGRD EILRAAHTVI GRNVKNILCS
PLRRTRESAA IFSDTLGVAV ETDERLRELN FGLFEGQTRR DLSAPPFADE FFRWTDETVP
YSPPGVESFS TAKERIVDFI RDTIEIPGPT LVVSHGVILR ILLCVCVLGI EPHHFRRLQI
DVGSISEIRL DRSRLQLWTL NTTTPRDLT