| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0306 |
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| Symbol | |
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| ID | 5454078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 329141 |
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| End bp | 329902 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640875870 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001411586 |
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| Protein GI | 154250762 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1877] Trehalose-6-phosphatase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTCGA TGAAGGAAGA CGGGCTGCCC TTGCCCGCCC CCCAACCCGG CTGGGCCCTG
TTTCTCGATT TTGACGGTAC GTTGACGGAG CTGGCTCCCT CGCCGGATGC CGTCGTTGTC
GATCCGGCCA TGCCGCAGGT TCTCGCCGGT CTTCTCGAAG GTCTTGGCGG TGCTGTCGCC
GTCGTTTCCG GCCGCAGCCT TGCGGAGGTC GACCGGCTGC TGGGCGTTGT CCTTCCGGGC
GCCGGTGTGC ATGGGCTTGA ACTGCGGACG CATCGCGACG CCGAAATCCG GCCCCCCGCC
GAGGCGGAGG GGATTGCCGT AATCGCAAGT GTGCTCACGC CACTCGTCGA GGCCGATCCG
CGGCTTATCC TGGAAACAAA GCCGGGTGCC GTCGCGCTTC ACTACCGCCG CGCGCCTGAA
CGCGAAAAGG AGTGCCGTGC CGCCATGAAA GCGGCAGTCG CAGGCACGAC CGGTATCCAT
GTGATCGACG GCAAGATGGT ACTGGAGGCC AAGCCCGACC ATGTGAACAA GGGCTATGCT
ATCGAAAATC TGATGCAGGT CCCGCCTTTT GCAGGCCGGG TGCCGGTCTT CGCGGGCGAT
GATCGCACCG ATGAGGACGG CTTCGGGGTC GTCAGGGCGC TGAAAGGCGT TACGATAAAG
ATCGGGCCGG GACTTTCCCG TGCCGAATAC CGGGTGGCTT CGGTCGAAGC CTTCATTGAT
TGGTTGAAAG AGGTGGCGTC GGTGTTGTCG GACACCGGCT GA
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| Protein sequence | MDSMKEDGLP LPAPQPGWAL FLDFDGTLTE LAPSPDAVVV DPAMPQVLAG LLEGLGGAVA
VVSGRSLAEV DRLLGVVLPG AGVHGLELRT HRDAEIRPPA EAEGIAVIAS VLTPLVEADP
RLILETKPGA VALHYRRAPE REKECRAAMK AAVAGTTGIH VIDGKMVLEA KPDHVNKGYA
IENLMQVPPF AGRVPVFAGD DRTDEDGFGV VRALKGVTIK IGPGLSRAEY RVASVEAFID
WLKEVASVLS DTG
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