Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0303 |
Symbol | |
ID | 5454331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 325344 |
End bp | 326084 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640875867 |
Product | SNARE associated Golgi protein |
Protein accession | YP_001411583 |
Protein GI | 154250759 |
COG category | [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAA CCGATCCCTC CGCCGGCCGG TTTTCGGCAC GCCGCCTCCT GCCGCTCATC GTGCTGGCGG CGGGGCTTGG AGCGTTTTTC GCGCTCGGCC TCCACCGCTA CCTGACGCTC GACACGCTGC GGGACAACCG CCAGGCGCTG TCCGATTGGG TGGCCGCCAA CTGGCTGCTC GCGGCGCTGG CCTATGTGCT CGCCTATATC GCCATTGTTG CCTTCTCGCT TCCCGCCGCT CTTGTCGCCA CGCTGACAGG CGGCTTCCTG TTCGGCACGG TGTTCGGCGG TCTGCTGACG GTTGTCGGCG CCACCATCGG CGCGACTTTG CTCTTCCTCG CCGCCCGCAC CGCCCTTGGC GACATGTTGC GCGCGAAAGC GGGGCCGAAG CTCCGCAAGC TGGAGGAGGG CTTCGGTGAG AACGCTTTCA GTTACATGCT GGTGCTGCGC CTCGTACCGC TCTTTCCGTT TTTCCTCGTC AATCTCGCGC CCGCCTTTCT CGGCGTGCCG CTTCGCACCT ATGTCGTGGC AACCTTTCTC GGCATCCTGC CCGGCACCTT CGTCTATGCG AGCCTTGGCA ATGGGCTCGG CGCAATCTTC GACGCGGGGC GCGACCCCGA TCTCGGCCTG ATTTTCCAGC CGCAGGTGAT CGGGCCCATT CTCGCCCTCG CGCTGCTGGC ACTTGTGCCT GTTGTCTATC GCCGCTTCTC CGGGAAGGCC CGGACAGGCG CGGCGGAATA A
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Protein sequence | MTETDPSAGR FSARRLLPLI VLAAGLGAFF ALGLHRYLTL DTLRDNRQAL SDWVAANWLL AALAYVLAYI AIVAFSLPAA LVATLTGGFL FGTVFGGLLT VVGATIGATL LFLAARTALG DMLRAKAGPK LRKLEEGFGE NAFSYMLVLR LVPLFPFFLV NLAPAFLGVP LRTYVVATFL GILPGTFVYA SLGNGLGAIF DAGRDPDLGL IFQPQVIGPI LALALLALVP VVYRRFSGKA RTGAAE
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