| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0299 |
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| Symbol | |
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| ID | 5455074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 321781 |
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| End bp | 323610 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640875863 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_001411579 |
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| Protein GI | 154250755 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGACA ACCGCAACTT CATCATCGCC ATCTTCCTGT CGGTCCTCGT CTTTATCGGC
TGGCAGTATT TCTTCATCGA ACCGCAGATG GAGGCGGAGC GCGCCAGGCA GGAGCAGCTT
GCGGCCGATA ACGGAACGGC GGAGCCGGCA CCCGGCGCCG CACCTTCCGC TCCCGGCGAT
GCGCGTCTCC CCAGCGTCGA TGCCCCGGCA ACACGCGCGC CCGGCGTTGC AGCTTCCGGC
GCGGTTGCCC GCGACGAAGC CCTGGCCCAG AGCGCGCGCG TTCCGATCCT TTCCGAAGAA
CTTCAGGGAT CGGTTTCGCT GCGCGGCGCG CGTTTCGACG ACCTGAAACT TCTCAAATAC
AATGTGACCG TCGACCCGGA GAGCCCGGAA GTCGAACTCT TCTCGCCGGT GCGGACCGAG
CGGCCCTATT TTTCCGAGTT CGGTTTCATC GCCGCCCCCG GCGCCAATAT CAACCTGCCG
ACATCGGCCA CCGAATGGGA GCTCGAAGCG GGCGACCGGC TGACGCCGCA GACGCCGGTG
ACGCTGCGCT GGGACAATGG CCAGGGCCTC GTCTTCCACC GCGAGATCGC GCTCGACGAG
CATTTCCTCT TCACCGTCAC CGACCGGATC GAGAATCTTT CGGCCAACGA AGTGACGCTC
TATCCCTACG GCCTCATCTC GCGCACCGGG CGCCCGGCGG GCAGCTCCTT CTTCATTCTG
CATGAAGGCT TCATCGGCGA GTTTCCGAGC GTCGGCGAAA AGGCGATCAC CTATGACGAT
GCCGAGGAAG ACGATCCCGT ACAGGTAACG GACACCGAAG GCTGGCTCGG CATCACCGAC
AAATACTGGG CCGCAGCCCT TGTGCCGCAA TCGGGCCTGA ACTTCGTCGC GAATTTCAGC
GAGCATCCCG ATCCCGCGAT CGTGAACTAC CAGGCCGATT TCCGTTATGG CGCACAGACC
GTGCCGGCCG GCGGAAGCAT CACGCTCAAC AACCGGCTTT TCGCGGGCGC AAAGGTCAGC
ACCGTCATCG ACAGCTACCG CGACGCCGGT ATCTACAAGT TCAGCCTGCT GATCGACTGG
GGCTGGTTCT GGTTCCTGAC GCAGCCGATG TTCGACGCGC TGCACTTCAT TGCGCTGCAT
GTCGGCAATT TCGGCATCGC CATTCTCGTC ATCACCGTGC TCATCAAGCT CGTCTTCTAT
CCGCTCGCCA ACAAGTCCTA TGTGGCCATG AGCAAGATGA AGAAGCTGCA GCCGGAAATG
GAAAAGCTGC GCGAGCGCTA CAAGGACGAC AAGTTGAAGC AGCAGCAGGA GATCATGGAG
CTCTACAAGA AGGAGAAGGT GAACCCGCTT GCCGGCTGCC TTCCCGTCCT GATCCAGATC
CCCGTCTTCT TCGCGCTCTA CAAGGTTCTG TTCGTCACCA TCGAAATGCG CCACGCGCCT
TTCTTCGGCT GGATCAACGA TCTTTCCGCG CCGGACCCGA CCTCGATCTT CAACCTGTTC
GGACTGATCC CGTGGGATCC GCCCTCGATG CTGATGATCG GCATCTGGCC GCTCATCATG
GGCTTCACCA TGTTCGTGCA GCAGCGCATG AACCCGCTGC CGGCCGATCC GATCCAGGCA
CAGATTTTCA CCTGGATGCC GGTCATCTTC ACTTTCATGC TGGCGAGCTT CCCAGCCGGT
CTCGTGATCT ACTGGGCGTG GAACAACACG CTGTCGGTGA TCCAGCAGGG CGTCATCATG
AAGCGGCAGG GTGTGAAGAT CGAAATCTTC TCCAATCTCG GTCTCGAAAA GCTCGCCGGT
GTCTTCTCCG GCAACAAGCC GAAATCCTGA
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| Protein sequence | MGDNRNFIIA IFLSVLVFIG WQYFFIEPQM EAERARQEQL AADNGTAEPA PGAAPSAPGD
ARLPSVDAPA TRAPGVAASG AVARDEALAQ SARVPILSEE LQGSVSLRGA RFDDLKLLKY
NVTVDPESPE VELFSPVRTE RPYFSEFGFI AAPGANINLP TSATEWELEA GDRLTPQTPV
TLRWDNGQGL VFHREIALDE HFLFTVTDRI ENLSANEVTL YPYGLISRTG RPAGSSFFIL
HEGFIGEFPS VGEKAITYDD AEEDDPVQVT DTEGWLGITD KYWAAALVPQ SGLNFVANFS
EHPDPAIVNY QADFRYGAQT VPAGGSITLN NRLFAGAKVS TVIDSYRDAG IYKFSLLIDW
GWFWFLTQPM FDALHFIALH VGNFGIAILV ITVLIKLVFY PLANKSYVAM SKMKKLQPEM
EKLRERYKDD KLKQQQEIME LYKKEKVNPL AGCLPVLIQI PVFFALYKVL FVTIEMRHAP
FFGWINDLSA PDPTSIFNLF GLIPWDPPSM LMIGIWPLIM GFTMFVQQRM NPLPADPIQA
QIFTWMPVIF TFMLASFPAG LVIYWAWNNT LSVIQQGVIM KRQGVKIEIF SNLGLEKLAG
VFSGNKPKS
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