| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0294 |
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| Symbol | |
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| ID | 5454394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 316865 |
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| End bp | 317611 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640875858 |
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| Product | pyrimidine 5'-nucleotidase |
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| Protein accession | YP_001411574 |
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| Protein GI | 154250750 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACAA AGACTTCATT CCCCGCCGAA CCTTCAGCAA AACCCGCCGC GCCACGCGGG
TTTTCCCATA TCGACAGCTG GATCTTCGAC CTCGACAACA CGCTTTATCC GCCCGCCTGC
GATCTCTTTG CCCAGGTCGA CGAGCGGATG ACGGCCTTCA TCGCGCGCTA TCTGGGCGTC
GATCCGGTCG AGGCACGGCG CATCCAGAAG GATTTCTACA TCGAGCACGG CACCACGCTG
TCCGGCCTGA TGGCGGTTCA CGGCATGGAG CCGAAGGAGT TTCTCGATTT CGTGCATGAC
ATCGACGTCT CGGCGGTGAT GGCCGATGCC GGTCTCGGCG AGGCGATCGC GCGGCTGCCG
GGGCGGAAGA TCGTCTTCAC CAACGGCTCG GTCGCACATG CGGAAAATGT CGTGCGCCAG
CTCGGCATCG GTCATGTCTT CGACGGCATA TTCGACATCG TGACGGCGCA GTATGAGCCG
AAGCCGCGGC TTCGCGCCTA TGAATGCCTG ATCGAGGCCA CGGGCATCGA GCCCGCGCGC
GCCGCCATGT TCGAGGATAT CGCGCGCAAT CTCGAAGTGC CCCATGCGCT CGGCATGACC
ACGGTCTGGG TGAGGCCCGG CCTGCCGGGG CCGGAGCGCC ATCAGCAATT GTCGCATGAG
GGCGCGGACG GGCCGCATGT CCATCACGTG ACGGACAATC TCGCCGACTT CCTGAAAGGG
ATCGCGCCGT CAGCGCCGGC CGAATAG
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| Protein sequence | MPTKTSFPAE PSAKPAAPRG FSHIDSWIFD LDNTLYPPAC DLFAQVDERM TAFIARYLGV
DPVEARRIQK DFYIEHGTTL SGLMAVHGME PKEFLDFVHD IDVSAVMADA GLGEAIARLP
GRKIVFTNGS VAHAENVVRQ LGIGHVFDGI FDIVTAQYEP KPRLRAYECL IEATGIEPAR
AAMFEDIARN LEVPHALGMT TVWVRPGLPG PERHQQLSHE GADGPHVHHV TDNLADFLKG
IAPSAPAE
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