| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0288 |
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| Symbol | |
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| ID | 5453840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 309547 |
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| End bp | 310101 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640875852 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_001411568 |
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| Protein GI | 154250744 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.869766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGCGTC CGACGCGAGA GACCTTCTGG GGCCCGTTTT CGCTTTTCGG CGCCCTGATC
GCGCTGGCGG GCTTTGCCGC CGACCGGCTG CATAAATGGT GGATGCTGGA CGTCTATGGC
ATCGCGGGGC GCGGCCGGGT GGAGGTGACG TCCTTTTTCG ACCTCGTCAT GGCCTGGAAT
AACGGCGTCA GCTACGGGCT CTTTCAGGCC GAAACGGCGA CGGGGGTCGC GATACTGGCG
GGCTTCGCGC TGCTGGTGAT CTGCGGCCTC GGGCTCTGGC TTGCCCGGGT TGAGTACAAG
GTGACGGCGC TCGCCATCGG CCTCATCCTC GGCGGGGCCA TAGGCAACGT CTATGACCGC
ATCGCCTACG GCGCCGTGGC GGACTTTTTT AGTTTTCACG CCTTCGGTTT TTACTGGTAT
ATCTTCAACA TTGCCGATGT GTGGATAGCT TTGGGCGTCA TTCTCATCAT CCTTGAATCG
GTATGGCCGG GCCTTGTGGG CGCCGGCAAA AAGAAAGACG GCCCGGACGG CGAGACGGGC
GGCACGCCGG TCTGA
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| Protein sequence | MERPTRETFW GPFSLFGALI ALAGFAADRL HKWWMLDVYG IAGRGRVEVT SFFDLVMAWN
NGVSYGLFQA ETATGVAILA GFALLVICGL GLWLARVEYK VTALAIGLIL GGAIGNVYDR
IAYGAVADFF SFHAFGFYWY IFNIADVWIA LGVILIILES VWPGLVGAGK KKDGPDGETG
GTPV
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