| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0287 |
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| Symbol | |
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| ID | 5453642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 306628 |
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| End bp | 309525 |
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| Gene Length | 2898 bp |
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| Protein Length | 965 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640875851 |
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| Product | isoleucyl-tRNA synthetase |
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| Protein accession | YP_001411567 |
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| Protein GI | 154250743 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.547871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCG AAGAAAACCC CACCGGCCGC GACTATCGCG ACACGCTTTT CCTGCCCACG
ACCGATTTTC CGATGAAGGC GGGGCTTCCC GCCCGCGAGC CCGAATGGCT GGCGCGCTGG
CAGAAGCTCG GTCTTTACGA GCGGCTGCGT GAAAGCGCGA AGGGCCGCGA GACCTTCATC
CTGCATGACG GCCCGCCCTA TGCGAATGGC AACATCCATA TCGGCCATGC GCTGAACAAG
ATCCTGAAGG ATGTCGTCGT CCGCTCGCAG CAGATGATGG GCAAGGACGC GGCTTACGTG
CCCGGCTGGG ACTGCCACGG CCTGCCGATC GAATGGCAGA TCGAGGAAAA ATACCGCAAG
CAGGGCAAGA ACAAGGACGA GGTGCCGGCG CTCGAATTCC GCCGCGAATG CCGCGAATTC
GCGCAAGGCT GGGTCGATGT CCAGAAGGAA GAATTCAAGC GGCTCGGCGT TTCCGGCGAG
TGGGACAATC CCTACCTCAC CATGTCCTTC GACGCGGAAG CGGGCATCGT CCGGGAATTC
CAGAAATTCC TGATGAACGG CTCGCTCTAT CGCGGCTCGA AGCCGGTGAT GTGGTCGGTA
GTGGAAAAGA CCGCGCTGGC GGAAGCGGAG GTCGAGTATC ACGACCATGT GAGCCACACG
ATCTGGGTGA AGTTTCCGGT TACGACTAGT TCGCCCAAAA CAAACTTCCC GATTGGACCG
GTAAATATTG TTATCTGGAC GACGACACCC TGGACCATTC CGGCGAACCG TGCGATCGCG
TTCAATCCCC GCATGGAATA CACATTCTTG GCGCACAACG CTCCGGATGG TCAGCAAGTT
TATTTGGTTG CTGAGGCTCT GCGCGAACGG TTTCTAAGTG AAGCTAAGCT TGATCCAGAG
GAGTGGAAGG TGCTCTGGTC CGTTCCGGGA TTCGAGTTGA AAGGAACGGT CTGCGCCCAC
CCCTTCCGTG GCGTTGAAGG AGCAGGCGAC TACTTTGATT TCGATGTGCC GCTTCTCGCG
GGCGATCATG TGACGGAAGA GGCGGGCACG GGCTTCGTGC ATACCGCGCC GGGACATGGC
CAGGACGACT ACATCATCTG GGTGGAAAAT TTCGGCTCGA AGGACATTCC CGAGACGGTG
AACGAGGAAG GCATCTATTA CGATCACGTT CCTCTTTTCG CGGGCAAGTT CGTGCTGACG
CGGCAGGGCA AGGAAGGCAC CGCCAATGCG GCCGTGATCG AGGAACTGGA AAAGGCGGGC
GCGCTGCTCG CGAGCGGCAA GGTCAAGCAT TCCTATCCGC ATTCATGGCG CTCCAAGGCG
CCGCTCATCT TTCGCAACAC GCCGCAATGG TTCGTGGCGA TGGATGCGAA GGTGGAAGCG
GCGGGCGGCA AGCCCTTCCG GCAGGTGGCG CTGGAAGAGA TCGAGAAGGT GCGCTGGGTG
CCTGCGCGCA ACCGCAACCG CATCCATTCC ATGGTCGAGA CGCGGCCCGA CTGGGTGCTG
TCGCGCCAGC GCGCCTGGGG CGTACCGCTG ACGCTCTTTG TACGGAAGGA TGACGGCACG
CTGCTGCGCG ACGAGAAGGT GAACGCGCGC ATCGTCGATG CCGTGGCGAA GGAAGGCGCG
GATGCCTGGT TCGAGCGCCC GGCAAGCGAC TTCCTCGGCA ATGAGCATAA TGCCGACGAA
TATGAGCGCG TGACGGATAT TCTGGACGTC TGGTTCGATT CAGGCTCTAC CCATGCTTTC
GTGCTGGAAG CGCGCGGCAT CCCCTCGCCC GCCGATCTCT ATCTCGAAGG CTCCGACCAG
CATCGCGGCT GGTTCCAGTC GTCGCTGCTC GAAAGCTGCG GCACGCGCGG CCGCGCGCCC
TACAAGCAGG TTCTCACCCA TGGCTTCACC ATGGACGAGA AGGGCCGCAA GATGTCGAAG
TCGCTCGGCA ACGTCATCGC GCCGCAAAAG ATCGTGGAAC AGAACGGCGC GGATATCCTG
CGCCTCTGGG TGGCTTCCAC CGACTATTGG GAAGACCACA ATATCGGCAA CGAGATCATC
AAATCGAACG TCGAAGCCTA TCGGAAGCTC CGCAACACGT TCCGCTATCT GCTCGGCAAT
CTCGCGGGTT TCGACGAGGC GGAGCGCGTC GCCGTTGCCG ACATGCCGGA ACTCGAACGC
TCGATCCTGC ACCGCCTTGC CGAACTCGAT GATCTGGTGC GCAAGGCCTA TGCGGATTAC
GACTTCAAGC GCGTGACGCA TACGCTGTCG AACTTCATGA ATGTCGATCT CTCGGCCTTC
TATTTCGACA TCCGGAAAGA CACGCTTTAT TGCGACGCGC CGTCGAGCTT GCGCCGCCGC
GCCTGCCGCA CGGTGCTGGA TGAACTCTTC TCGCGCCTGA CCGCATGGCT CGCGCCGGTG
CTCTGTTTCA CGACCGAGGA AGTCTGGCTG ACGCGCTTCC CCGGCGACGA GGCATCGGTG
CATCTGCGGA CCTTCCCGGA GACGCCGGCC GAATGGCGGG ACGAGGCGCT GGCTGCCAAA
TGGCGCAAGG TGCGCGAGCT TCGCCGCGTC GTCACTGGCG CGCTCGAAGT CGAACGCCGC
GAGAAGCGCA TCGGCGCGAG CCTCGAAGCG GCGCCGGATG TCTATGTCTC GAAGCCCGAC
TATGTCGCCG CGCTGAAAGG CGTCGATCTC GCCGAACTCG CGATTGCGAG CCAGGCGACA
TTGATCGAGG GCGAGGGCCC GGCGGATGCC TTCCGCCTCG ACGATGTGCC GGGCGTCGCC
GTGGTGGCGA AGCTGGCGGA AGGGCGCAAA TGCGCGCGCT CCTGGCGCAT CCTGCCGGAA
GTGGGCACCG ACCCCGATTA TCCCGACCTG TCCTTGCGCG ATGCGGCGGC GGTGCGGGAA
TATGACGCGC GCGGCTGA
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| Protein sequence | MSTEENPTGR DYRDTLFLPT TDFPMKAGLP AREPEWLARW QKLGLYERLR ESAKGRETFI
LHDGPPYANG NIHIGHALNK ILKDVVVRSQ QMMGKDAAYV PGWDCHGLPI EWQIEEKYRK
QGKNKDEVPA LEFRRECREF AQGWVDVQKE EFKRLGVSGE WDNPYLTMSF DAEAGIVREF
QKFLMNGSLY RGSKPVMWSV VEKTALAEAE VEYHDHVSHT IWVKFPVTTS SPKTNFPIGP
VNIVIWTTTP WTIPANRAIA FNPRMEYTFL AHNAPDGQQV YLVAEALRER FLSEAKLDPE
EWKVLWSVPG FELKGTVCAH PFRGVEGAGD YFDFDVPLLA GDHVTEEAGT GFVHTAPGHG
QDDYIIWVEN FGSKDIPETV NEEGIYYDHV PLFAGKFVLT RQGKEGTANA AVIEELEKAG
ALLASGKVKH SYPHSWRSKA PLIFRNTPQW FVAMDAKVEA AGGKPFRQVA LEEIEKVRWV
PARNRNRIHS MVETRPDWVL SRQRAWGVPL TLFVRKDDGT LLRDEKVNAR IVDAVAKEGA
DAWFERPASD FLGNEHNADE YERVTDILDV WFDSGSTHAF VLEARGIPSP ADLYLEGSDQ
HRGWFQSSLL ESCGTRGRAP YKQVLTHGFT MDEKGRKMSK SLGNVIAPQK IVEQNGADIL
RLWVASTDYW EDHNIGNEII KSNVEAYRKL RNTFRYLLGN LAGFDEAERV AVADMPELER
SILHRLAELD DLVRKAYADY DFKRVTHTLS NFMNVDLSAF YFDIRKDTLY CDAPSSLRRR
ACRTVLDELF SRLTAWLAPV LCFTTEEVWL TRFPGDEASV HLRTFPETPA EWRDEALAAK
WRKVRELRRV VTGALEVERR EKRIGASLEA APDVYVSKPD YVAALKGVDL AELAIASQAT
LIEGEGPADA FRLDDVPGVA VVAKLAEGRK CARSWRILPE VGTDPDYPDL SLRDAAAVRE
YDARG
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