Gene Plav_0285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0285 
Symbol 
ID5455238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp305237 
End bp305524 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content53% 
IMG OID640875849 
Productexcinuclease ABC subunit C 
Protein accessionYP_001411565 
Protein GI154250741 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.722146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.992997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGACT ACTATGTCTA CATTCTTGCG AACGGACGAA ATGGAACGCT CTATACGGGC 
GTGACCAACG ACATTCAGCG CCGCGTCTCC GAACATCGAG AGGAAATCGA CAAAGGCTTC
ACCAGCCGTT ATGGCGTGAA GCATCTCGTC TGGTACGAAG TGCATAGCGA AGCACTGACG
GCGATACAGC GGGAGAAAAA TCTAAAGCAC TGGTCACGCG CGTGGAAGAT CGCGTTGATC
GAGGAGGCGA ATCCAGCCTG GCACGATCTC TATCCGGGGC TCTTTTGA
 
Protein sequence
MKDYYVYILA NGRNGTLYTG VTNDIQRRVS EHREEIDKGF TSRYGVKHLV WYEVHSEALT 
AIQREKNLKH WSRAWKIALI EEANPAWHDL YPGLF