| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0261 |
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| Symbol | |
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| ID | 5454646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 283265 |
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| End bp | 283786 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640875825 |
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| Product | peptide deformylase |
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| Protein accession | YP_001411541 |
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| Protein GI | 154250717 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.632283 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATAC GCGAAATCAT CACCGCGCCG GACCCCCGGC TGAAAGAGGT CTCCAAACCC
GTCGAGCGGG TGGACGCGGA TCTGCGCGCG CTCATGGACG ACATGCTGGA GACCATGTAT
GCGGCGCCGG GCATCGGTCT CGCCGCCATC CAGATCGGGG TGCCCAAACA GGTCATCGTC
ATGGACCTTG CCCGCGAAGG CGAGGAGCCG CAGCCGCGCT ATTTCATCAA CCCGGAAATC
CTCTGGACCT CGGAAGACGT GGCCGTCTAC GAGGAGGGCT GCCTGTCGGT GCCGGAATTC
TATGAGGATG TCGAGCGGCC GGCGCGCTGC CGCGTGCGCT ATCTCGACTA TCAGGGCGAA
ATCCGCGAGG AGGAGTGCGA CGACCTGCTC GCGACCTGCC TACAGCACGA GATGGACCAT
CTGAAGGGCA TTCTCTTCAT CGATCACCTC TCGCGCACCA AGCGCTCCAT GCTGCTGAAG
AAGCTGATGA AGCAGAAGAA GCTTCAGAAG GAACCGGCTT GA
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| Protein sequence | MAIREIITAP DPRLKEVSKP VERVDADLRA LMDDMLETMY AAPGIGLAAI QIGVPKQVIV
MDLAREGEEP QPRYFINPEI LWTSEDVAVY EEGCLSVPEF YEDVERPARC RVRYLDYQGE
IREEECDDLL ATCLQHEMDH LKGILFIDHL SRTKRSMLLK KLMKQKKLQK EPA
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