Gene Plav_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0219 
Symbol 
ID5456127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp237383 
End bp237739 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content62% 
IMG OID640875781 
Productribosomal protein L20 
Protein accessionYP_001411499 
Protein GI154250675 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCG TCAAAAGGGG CGTTACAGCA CACGCCCGCC ACCGCAAGAT CATCAAAAAG 
GCGAAGGGCT ATTACGGCCG TCGCAAGAAC GCCTTCCGCA CGGCCAACCA GGCCGTCGAG
AAGGCCGGCC AATATGCCTA TCGCGACCGC CGCACCAGAA AGCGCAATTT CCGCGCCCTC
TGGATCCAGC GCATCAACGC CGGTGTCCGC GAGCACGGCC TGACCTATTC GCGATTTATC
GACGGCCTCG CCAAGGCTGG CATCGAGGTG GACCGCAAGG TTCTCTCCGA CATCGCCATC
CATGAGCCCG AGGCCTTCAA GGCTCTGGTC GAGCAGGCGC AGGCCGCACT CAAGTAA
 
Protein sequence
MSRVKRGVTA HARHRKIIKK AKGYYGRRKN AFRTANQAVE KAGQYAYRDR RTRKRNFRAL 
WIQRINAGVR EHGLTYSRFI DGLAKAGIEV DRKVLSDIAI HEPEAFKALV EQAQAALK