Gene Plav_0207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0207 
Symbol 
ID5456110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp229721 
End bp230242 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content59% 
IMG OID640875769 
Producttranslation initiation factor IF-3 
Protein accessionYP_001411487 
Protein GI154250663 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCGC CGCCCACCAG AGAGGGCCCG CGCATAAACG ACATGATCGA TGAGCCGACC 
GTGTTGCTCA TTGACGCCGA GGGCGAAAAG CGCGGCGTTA TTCCCACCGA TGAAGCGATC
AGGATGGCTG AAGAGGCCGG CCTCGATCTG GTTGAGGTAT CGCCGAACGC GAAGCCTCCC
GTGTGCAAGC TTCTCGACTA CGGGAAATTC AAATACCAGG CACAGAAGAA GGCCAACGAG
GCGCGCAAGA AACAGAAGAC CGTCGAGGTC AAGGAAATCA AGATGCGCCC GAACATCGAC
ACGCATGACT ACGAGGTCAA GATGCGCGCG ATGCTTCGCT TCTTCGAGGA AGGCGACAAG
GTGAAAGTCA CCCTGCGCTT CCGCGGCCGC GAAATGGCGC ATCAGGAACT CGGCATGGTG
CTGCTGAACA AGGTCAAGGA AGAGGTCGAG CCGATCGCGA AGGTCGAACT CTACCCCCGG
CTCGAAGGCC GGCAGATGAT CATGGTGCTG GCGCCGAAAT AA
 
Protein sequence
MQAPPTREGP RINDMIDEPT VLLIDAEGEK RGVIPTDEAI RMAEEAGLDL VEVSPNAKPP 
VCKLLDYGKF KYQAQKKANE ARKKQKTVEV KEIKMRPNID THDYEVKMRA MLRFFEEGDK
VKVTLRFRGR EMAHQELGMV LLNKVKEEVE PIAKVELYPR LEGRQMIMVL APK