| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0196 |
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| Symbol | |
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| ID | 5454909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 220820 |
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| End bp | 221431 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640875757 |
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| Product | 3'-5' exonuclease |
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| Protein accession | YP_001411476 |
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| Protein GI | 154250652 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.950897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTCA CGCTGCACAG GGGCGATCTC CCCGAGGGGC TTTCCTTCGG CGAAAGCGTC
GCTGTCGATA CCGAGACGAT GGGCCTCCAT CCCGAGCGGG ACCAGCTCTG CGTGGTCCAG
CTCTCGGCGG GCGACGGCAA CGCCCATATC GTCCAGCTCG ACCGCGGCAC CTATAACGCG
CCGCGCCTCA GGGCGCTGAT GGCCGATCCC GCCATCCTCA AGATCTTCCA CTTCGCGCGT
TTCGACGTCG CCATGCTGCA GCGTTATCTC GGTGTGGTCA CGGCGCCGGT CTATTGCACC
AAGATCGCCT CGAAGCTTGT CCGCACCTAT ACCGACCGTC ACGGTCTGAA GGATCTCGCG
CGAGAACTGG TCAATATCGA CATGTCGAAG CAGCAGCAAA GCTCGGACTG GGGTGCCGCC
AGCCTCACCG ACGCGCAGCT CAGCTATGCG GCGTCCGACG TTCTCCACCT TCACGAGATC
AAGTCGGTGC TTGACGGCAT GCTCGCCCGC GAGGGCCGCA CCGAACTCGC CAGGGCCTGT
TTCGCCTTTC TTCCGGTTCG CGCCGCGCTC GACCTTGCGG GCTGGCCGGA AGAAGATATC
TTCGCTCATT GA
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| Protein sequence | MAVTLHRGDL PEGLSFGESV AVDTETMGLH PERDQLCVVQ LSAGDGNAHI VQLDRGTYNA
PRLRALMADP AILKIFHFAR FDVAMLQRYL GVVTAPVYCT KIASKLVRTY TDRHGLKDLA
RELVNIDMSK QQQSSDWGAA SLTDAQLSYA ASDVLHLHEI KSVLDGMLAR EGRTELARAC
FAFLPVRAAL DLAGWPEEDI FAH
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