Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0174 |
Symbol | fadE |
ID | 5453359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 195676 |
End bp | 197946 |
Gene Length | 2271 bp |
Protein Length | 756 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640875735 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_001411454 |
Protein GI | 154250630 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.92795 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTGGA AAGCAGCAAG GCGGGACTAT CTGACGCGGC CCATTTTCGG CTGGGCGAAG GGCGTGCTGC CCAGCATGTC CGACACCGAG CGCGAGGCGC TTGAAGCGGG CGATATCTGG TGGGAGGCCG ATCTTTTCAC CGGAAATCCC GATTGGCAGA AGCTGCTGGA TACGCCGAAG CCACTGCTCT CTCAAGAAGA ACAGGCTTTC ATGGATGGGC CCGTCGAAGA GCTGTGCGAT ATGCTCGACG ACTGGAAGAT CACCTGGGAA GACGGCGACC TGTCCCCGGA GGCCTGGGAG TTCATCAAGG CCAACCGTTT CTTCGGCATG ATCATTCCGA AGCAGTATGG CGGGCTTGAG TTTTCGGCCT TCGCGCATTC CGAAGTCATC CGCAAACTGT CGAGCCGCTC AGCGGCCGGC GCCGTTACTG TCATGGTGCC GAATTCCCTT GGGCCCGGCG AACTTCTGAT GCAGTTCGGC ACGGAGGCGC AGCGCGAGTA CTGGCTGCCC CGCCTCGCAC GAGGCGAAGA GATACCCTGC TTCGGCCTCA CGAGCCCCGA TGCGGGATCC GATGCCGCCT CGATGGTGGA TAGCGGCGTG GTCTGCCGGG GTGTTTTCAA CGGCGAGGAA GTGCTCGGCA TAAGGCTCAA CTGGCACAAG CGTTATATTA CGCTCGCGCC CGTCGCGACC GTTCTCGGTC TTGCGTTCAA ACTGCGCGAT CCGGATCACC TTCTCGGCGA AGAGGAAGAA CGCGGCATTA CCGTCGCGCT TGTCCCAGCC GGTCTCGAAG GCGTTACCAC CGGACGGCGG CATCTCCCCT CCTTCCAGAT GTTTCAGAAC GGCCCCACGG AAGGCAAGGA CGTCTTCATT CCGCTCGATC ATGTGATCGG CGGCGCCGAG CAGGTCGGCC AGGGCTGGAA AATGCTGATG TCCGCGCTGG CGGCGGGGCG AGGGATTTCC TTGCCGTCGC TCTCGGCGGC GGCCGCCGCA TTCTCCGCCC GCACCACCGG CGCCTATGCG CGGGTACGGG AGCAGTTCAA TCTTCCCATC GGCAAGTTCG AAGGCGTGCA GGCGCGGCTC GGCCATATCG CGGGCACGGC CTATCTGCTC GATGCAGGCC GCAGGCTCAC CTGCGCTGGA TTGGACGAAG GCCGCAAGCT GGCGGTCATT TCGGCGATCA TGAAGATGCA GGCAACGAAC CGGATGCGCG TTGCGGTGAA CGACGCGATG GATATTCATG CCGGCAAGGC CGTGATCGAC GGTCCGTCGA ACTATATGGG TAATCTCTAT CGCGCAGTGC CGGTCGGCAT CACCGTCGAA GGCGCGAATA TCCTGACGCG CAATCTCATT GTCTTCGGCC AGGGCGCCAT TCGCAGCCAT CCCCATCTGC TGAAGGAGAT GGAAGCCCTC GGCATCGAGG ATCGGGACGA AGCACTCGGC CGTTTCGACG AGGCCTTCTG GCGCCATGTC GGCCACAGCA TGAAGACAAT GGGCCGTGCC TTGCTTCGCA ACTGGACAGG GGGGCTTTTA TCGCCCGCAC CCCGCGCGGG AAAAGTGCGC CCTTATTATC GCCAGCTTTC GCGTCATGCC GCCGGCTTCG CGCTTGTCGC CGATCTGGCG CTTCTGACGC TGGGCGGCGG GCTGAAGCGC AAGGAAATGC TGTCGGCTCG GCTCGGCGAT ATACTGTCCG AGCTTTACCT GATGTCCGCC GTGCTCAAGC GTTGGGAGGA TGACGGCCGG CAGGTGGACG ACCTTCCCCT CGTTGCCTAT TGCATGGAGG AGAGTTTCGC GGCCATCGAT TCCCGTTTCG CGGAGATCTT CGCGAACCTG CCGAACCGTT TCGTGGCTGT CATCGCCAAG CTCATCGTGC AACCGCTCGG CCCCCGCAGG CGCGGACCGA AGGACAAGCT TGCGATGCGT TGTGCCGAAC TTCTGCTTGC GCCTTCGGCC ACGCGCGACA GGCTCACCTC GGGCCTGCAT CTCGGACGGA GCGGCGATCC CGTGGCAAAG CTCGAGAAGG CATTCAGCCT TTCGGTCCTC ACCGAGAAGG CGCGCGAGAA GATGCGGGAA GGCGGGACGG ACGATCCGGA AACGGCGCTC GCAGGCGGCC GGATAACGGC CGAGGACGCA GCCATGATTG CGGAATTGCA GGCTGTCGTG GCTGAAGTGA TCGCGGTCGA TGATTTCGCT CCGGAAGAGC TCGCCCTGCA CGGCACGGCC GTAAAGGACG AGGATGCAGA CGAGCCGTTG ACGCGGCGTG CCCAAGGATA G
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Protein sequence | MDWKAARRDY LTRPIFGWAK GVLPSMSDTE REALEAGDIW WEADLFTGNP DWQKLLDTPK PLLSQEEQAF MDGPVEELCD MLDDWKITWE DGDLSPEAWE FIKANRFFGM IIPKQYGGLE FSAFAHSEVI RKLSSRSAAG AVTVMVPNSL GPGELLMQFG TEAQREYWLP RLARGEEIPC FGLTSPDAGS DAASMVDSGV VCRGVFNGEE VLGIRLNWHK RYITLAPVAT VLGLAFKLRD PDHLLGEEEE RGITVALVPA GLEGVTTGRR HLPSFQMFQN GPTEGKDVFI PLDHVIGGAE QVGQGWKMLM SALAAGRGIS LPSLSAAAAA FSARTTGAYA RVREQFNLPI GKFEGVQARL GHIAGTAYLL DAGRRLTCAG LDEGRKLAVI SAIMKMQATN RMRVAVNDAM DIHAGKAVID GPSNYMGNLY RAVPVGITVE GANILTRNLI VFGQGAIRSH PHLLKEMEAL GIEDRDEALG RFDEAFWRHV GHSMKTMGRA LLRNWTGGLL SPAPRAGKVR PYYRQLSRHA AGFALVADLA LLTLGGGLKR KEMLSARLGD ILSELYLMSA VLKRWEDDGR QVDDLPLVAY CMEESFAAID SRFAEIFANL PNRFVAVIAK LIVQPLGPRR RGPKDKLAMR CAELLLAPSA TRDRLTSGLH LGRSGDPVAK LEKAFSLSVL TEKAREKMRE GGTDDPETAL AGGRITAEDA AMIAELQAVV AEVIAVDDFA PEELALHGTA VKDEDADEPL TRRAQG
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