| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0174 |
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| Symbol | fadE |
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| ID | 5453359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 195676 |
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| End bp | 197946 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640875735 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_001411454 |
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| Protein GI | 154250630 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.92795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTGGA AAGCAGCAAG GCGGGACTAT CTGACGCGGC CCATTTTCGG CTGGGCGAAG
GGCGTGCTGC CCAGCATGTC CGACACCGAG CGCGAGGCGC TTGAAGCGGG CGATATCTGG
TGGGAGGCCG ATCTTTTCAC CGGAAATCCC GATTGGCAGA AGCTGCTGGA TACGCCGAAG
CCACTGCTCT CTCAAGAAGA ACAGGCTTTC ATGGATGGGC CCGTCGAAGA GCTGTGCGAT
ATGCTCGACG ACTGGAAGAT CACCTGGGAA GACGGCGACC TGTCCCCGGA GGCCTGGGAG
TTCATCAAGG CCAACCGTTT CTTCGGCATG ATCATTCCGA AGCAGTATGG CGGGCTTGAG
TTTTCGGCCT TCGCGCATTC CGAAGTCATC CGCAAACTGT CGAGCCGCTC AGCGGCCGGC
GCCGTTACTG TCATGGTGCC GAATTCCCTT GGGCCCGGCG AACTTCTGAT GCAGTTCGGC
ACGGAGGCGC AGCGCGAGTA CTGGCTGCCC CGCCTCGCAC GAGGCGAAGA GATACCCTGC
TTCGGCCTCA CGAGCCCCGA TGCGGGATCC GATGCCGCCT CGATGGTGGA TAGCGGCGTG
GTCTGCCGGG GTGTTTTCAA CGGCGAGGAA GTGCTCGGCA TAAGGCTCAA CTGGCACAAG
CGTTATATTA CGCTCGCGCC CGTCGCGACC GTTCTCGGTC TTGCGTTCAA ACTGCGCGAT
CCGGATCACC TTCTCGGCGA AGAGGAAGAA CGCGGCATTA CCGTCGCGCT TGTCCCAGCC
GGTCTCGAAG GCGTTACCAC CGGACGGCGG CATCTCCCCT CCTTCCAGAT GTTTCAGAAC
GGCCCCACGG AAGGCAAGGA CGTCTTCATT CCGCTCGATC ATGTGATCGG CGGCGCCGAG
CAGGTCGGCC AGGGCTGGAA AATGCTGATG TCCGCGCTGG CGGCGGGGCG AGGGATTTCC
TTGCCGTCGC TCTCGGCGGC GGCCGCCGCA TTCTCCGCCC GCACCACCGG CGCCTATGCG
CGGGTACGGG AGCAGTTCAA TCTTCCCATC GGCAAGTTCG AAGGCGTGCA GGCGCGGCTC
GGCCATATCG CGGGCACGGC CTATCTGCTC GATGCAGGCC GCAGGCTCAC CTGCGCTGGA
TTGGACGAAG GCCGCAAGCT GGCGGTCATT TCGGCGATCA TGAAGATGCA GGCAACGAAC
CGGATGCGCG TTGCGGTGAA CGACGCGATG GATATTCATG CCGGCAAGGC CGTGATCGAC
GGTCCGTCGA ACTATATGGG TAATCTCTAT CGCGCAGTGC CGGTCGGCAT CACCGTCGAA
GGCGCGAATA TCCTGACGCG CAATCTCATT GTCTTCGGCC AGGGCGCCAT TCGCAGCCAT
CCCCATCTGC TGAAGGAGAT GGAAGCCCTC GGCATCGAGG ATCGGGACGA AGCACTCGGC
CGTTTCGACG AGGCCTTCTG GCGCCATGTC GGCCACAGCA TGAAGACAAT GGGCCGTGCC
TTGCTTCGCA ACTGGACAGG GGGGCTTTTA TCGCCCGCAC CCCGCGCGGG AAAAGTGCGC
CCTTATTATC GCCAGCTTTC GCGTCATGCC GCCGGCTTCG CGCTTGTCGC CGATCTGGCG
CTTCTGACGC TGGGCGGCGG GCTGAAGCGC AAGGAAATGC TGTCGGCTCG GCTCGGCGAT
ATACTGTCCG AGCTTTACCT GATGTCCGCC GTGCTCAAGC GTTGGGAGGA TGACGGCCGG
CAGGTGGACG ACCTTCCCCT CGTTGCCTAT TGCATGGAGG AGAGTTTCGC GGCCATCGAT
TCCCGTTTCG CGGAGATCTT CGCGAACCTG CCGAACCGTT TCGTGGCTGT CATCGCCAAG
CTCATCGTGC AACCGCTCGG CCCCCGCAGG CGCGGACCGA AGGACAAGCT TGCGATGCGT
TGTGCCGAAC TTCTGCTTGC GCCTTCGGCC ACGCGCGACA GGCTCACCTC GGGCCTGCAT
CTCGGACGGA GCGGCGATCC CGTGGCAAAG CTCGAGAAGG CATTCAGCCT TTCGGTCCTC
ACCGAGAAGG CGCGCGAGAA GATGCGGGAA GGCGGGACGG ACGATCCGGA AACGGCGCTC
GCAGGCGGCC GGATAACGGC CGAGGACGCA GCCATGATTG CGGAATTGCA GGCTGTCGTG
GCTGAAGTGA TCGCGGTCGA TGATTTCGCT CCGGAAGAGC TCGCCCTGCA CGGCACGGCC
GTAAAGGACG AGGATGCAGA CGAGCCGTTG ACGCGGCGTG CCCAAGGATA G
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| Protein sequence | MDWKAARRDY LTRPIFGWAK GVLPSMSDTE REALEAGDIW WEADLFTGNP DWQKLLDTPK
PLLSQEEQAF MDGPVEELCD MLDDWKITWE DGDLSPEAWE FIKANRFFGM IIPKQYGGLE
FSAFAHSEVI RKLSSRSAAG AVTVMVPNSL GPGELLMQFG TEAQREYWLP RLARGEEIPC
FGLTSPDAGS DAASMVDSGV VCRGVFNGEE VLGIRLNWHK RYITLAPVAT VLGLAFKLRD
PDHLLGEEEE RGITVALVPA GLEGVTTGRR HLPSFQMFQN GPTEGKDVFI PLDHVIGGAE
QVGQGWKMLM SALAAGRGIS LPSLSAAAAA FSARTTGAYA RVREQFNLPI GKFEGVQARL
GHIAGTAYLL DAGRRLTCAG LDEGRKLAVI SAIMKMQATN RMRVAVNDAM DIHAGKAVID
GPSNYMGNLY RAVPVGITVE GANILTRNLI VFGQGAIRSH PHLLKEMEAL GIEDRDEALG
RFDEAFWRHV GHSMKTMGRA LLRNWTGGLL SPAPRAGKVR PYYRQLSRHA AGFALVADLA
LLTLGGGLKR KEMLSARLGD ILSELYLMSA VLKRWEDDGR QVDDLPLVAY CMEESFAAID
SRFAEIFANL PNRFVAVIAK LIVQPLGPRR RGPKDKLAMR CAELLLAPSA TRDRLTSGLH
LGRSGDPVAK LEKAFSLSVL TEKAREKMRE GGTDDPETAL AGGRITAEDA AMIAELQAVV
AEVIAVDDFA PEELALHGTA VKDEDADEPL TRRAQG
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