| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0172 |
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| Symbol | |
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| ID | 5454767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 192934 |
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| End bp | 193662 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640875733 |
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| Product | PadR-like family transcriptional regulator |
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| Protein accession | YP_001411452 |
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| Protein GI | 154250628 |
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| COG category | [K] Transcription |
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| COG ID | [COG1695] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.786766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGGAGTT CCGTCCTAAA AGCCCGGATT TACCCGTGTT ACCGCCATGC CGCATCGCAC
AAAAAACGGT GCAAATTGCG CCGCTTGCCG CGAGGTCCCC TTGGCAACCC GAAGTGCTCT
CCATATATAG GCCCGATATA TCGATCCAAT ATAGTCCCAT CGGCCCGGCC AGCTGGGAAC
AAGGACAGCC TTTCCATGCA AGTGACCACG CTTTGCCTCG GCGCCCTGGT CTTCGGCGAA
GCCACTGGCT ACGAGATCAA CAAGATGTTC GAGGATGGCC CCTTCAGCCA TTTCCTCGAC
GCGAGCTATG GCTCGATCTA TCCCGCGCTC ACCCGGCTTA CCGAAGAAGG TCTCGTTACT
TGCAAGGCGG AACCGCAGGA GCGGCGTCCG GACAAGAAAA TCTATTCGCT GACCGAAAAG
GGGCGAAAGA GCCTCAGCGA AGCGCTGCAG CAGACACTGG CGCCGGACAA GTTTCGTTCC
GAATTCCTGT TCACCGTTCT CTTCGCTCAT CTTCTGCCGC GGAGCCGCGT CCGCAGTCTG
GTCGACCAAC GCCTGGCGGC GATGAAAGAA AAAGTCGAGG AAATGGCGCA GCCGGATGAA
GGAGATACCC CCGGCATGGA CTTTGCCCGG CAATATGGCC TGGCCGTCTA CAGCGCCTCC
ATTCAATTCC TGGAACACCA CAGACACCTG ATCGAAGAGA TCGCAACCGA AGAAGAAGCC
CATGTTTGA
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| Protein sequence | MRSSVLKARI YPCYRHAASH KKRCKLRRLP RGPLGNPKCS PYIGPIYRSN IVPSARPAGN
KDSLSMQVTT LCLGALVFGE ATGYEINKMF EDGPFSHFLD ASYGSIYPAL TRLTEEGLVT
CKAEPQERRP DKKIYSLTEK GRKSLSEALQ QTLAPDKFRS EFLFTVLFAH LLPRSRVRSL
VDQRLAAMKE KVEEMAQPDE GDTPGMDFAR QYGLAVYSAS IQFLEHHRHL IEEIATEEEA
HV
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