| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0159 |
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| Symbol | |
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| ID | 5456503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 173954 |
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| End bp | 174976 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640875720 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001411439 |
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| Protein GI | 154250615 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATA CCCTTGTCAA ATCCAGCCCG GAAACACTGC CCGCCGATTG GTACTGGAGC
GAGGACGCTT GGCAAATAGA ACGCCGTGAA ATCTGGGCAA AGCACTGGTT CCTGATAGCC
CGTACGCAAC AGTTCGATGT AGCGGGCGAT TATGTTTCAG CGACGTTTGC GGGCTACCCG
ATTTTCGCGA TCAAAGGCAA GGACGGCTTG GTGCGCGCCT TTCACAATGC CTGCCGCCAC
CGCGCTTCCC CCTTGGTGCA AGAATGCGCG GGACATGTGG AGCGACTCAG TTGCCCCTAT
CACCGCTGGC TTTACGATTT CGAGGGCCGG CTGCGTGGCG CCCCCACCAT GGAGATCGAC
AAGGAGGAGT ACGGACTCTT TCCCATCCGC TGCGAGATAT GGCGCGGACT GGTCTTCGTG
TCGCTCGATC TTGCGGCGAT GCCGCTCTCC GGCTGGCTGG CAGATATCGC CACCGCGGCG
CTACGCTATC CCCTGGAGGA GATGCAGCTC GCTCGCGAGT TCACGATCGA GGCGGATGTG
AACTGGAAAA CCTATGGCGA CAACTATGCC GAGGCATGGC ACATACCTAC GATCCATCCG
GGGCTCAACG CAGCGATTGA CATGGCGAGC TATAAAATCG CGACGGTAGG ACATACGCTG
CAGAGCCACA TGGCGGACGC GCGTGACGGC GGCAAGACGG ATGGCTTCTG GGTATGGCGG
CTGCCGGGGC TCTTTTTCAA TATGTACAAC TGGGGAATGA ACGTCGCGCA GCTCGAACCT
TTGGGGCCTC GCCGCATGAA GCTGACCTAT CGCTACTTCG TGAAGGACCT CGATCCGACG
AAGCAAGCAG AGCGAGATGC ACTTATCGAC TGGGCCTACA TGGTGGCAAA GGAAGACATC
GATATCTGCA TTGCCGTACA AAGAAATCTC GAAACCGGCA TCTACGAACG GGGACGGCTT
TCCTCCGTTC ACGAGAATGG TGTCATCCAG TTTCAGGAAA TGGTGGCCTC GGCGCATCGT
TGA
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| Protein sequence | MSDTLVKSSP ETLPADWYWS EDAWQIERRE IWAKHWFLIA RTQQFDVAGD YVSATFAGYP
IFAIKGKDGL VRAFHNACRH RASPLVQECA GHVERLSCPY HRWLYDFEGR LRGAPTMEID
KEEYGLFPIR CEIWRGLVFV SLDLAAMPLS GWLADIATAA LRYPLEEMQL AREFTIEADV
NWKTYGDNYA EAWHIPTIHP GLNAAIDMAS YKIATVGHTL QSHMADARDG GKTDGFWVWR
LPGLFFNMYN WGMNVAQLEP LGPRRMKLTY RYFVKDLDPT KQAERDALID WAYMVAKEDI
DICIAVQRNL ETGIYERGRL SSVHENGVIQ FQEMVASAHR
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