| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0150 |
|---|
| Symbol | |
|---|
| ID | 5454709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 165844 |
|---|
| End bp | 166497 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640875710 |
|---|
| Product | cytidylate kinase |
|---|
| Protein accession | YP_001411430 |
|---|
| Protein GI | 154250606 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0283] Cytidylate kinase |
|---|
| TIGRFAM ID | [TIGR00017] cytidylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCGGG CAGCGAGCAC CATCATCGCG ATCGATGGCC CTGCCGCTTC CGGCAAGGGG
ACGCTCGCTC GGCGGCTCGC TCGGCACTAC GACTTTGCCT ATCTCGACAC GGGGTCGCTT
TATCGGGCGG TGGGCCAAGC GGTATTGGCG GCGGGCGGCA GCCCCGCCGA CGAGGCGGCG
GCCCTCGCGG CGGCCGAGGC GCTCGATGTC AACAGAATCG ACGAGATGGC CATCCGCAGC
AGAGAAGCAG GCGAAGCAGC CTCCGTCGTG GCCGCAATGC CCAAGGTCCG GGCGGCCATC
CTTCATTTCC AGCGCGATTT CGCGGCAAAT CCGCCGGGCG GCAAAGCAGG GGCGGTCCTG
GACGGACGCG ACATCGGCAC GGTCGTCTGC CCGGATGCAA GGGCGAAACT ATTCGTGACG
GCAAGCCCCG AGGTCCGGGC GCACCGGCGC TGGCTCGAAC TCAAGGGATC GGGGTCGGCG
GCCAGCGAGG CACAAATTGT GGACGATATT CGCGACCGCG ACCGGCGGGA CGCCGAACGG
ACGGCGAGCC CCATGAAGCC GGCGGAGGAC GCATACTTGC TCGACACCTC CAATTTGAGT
ATAGAAGCGG CGTTCGGCGC AGCCGTCGCG ATCATAGACA AAGCAATGAG TTAA
|
|---|
| Protein sequence | MSRAASTIIA IDGPAASGKG TLARRLARHY DFAYLDTGSL YRAVGQAVLA AGGSPADEAA
ALAAAEALDV NRIDEMAIRS REAGEAASVV AAMPKVRAAI LHFQRDFAAN PPGGKAGAVL
DGRDIGTVVC PDARAKLFVT ASPEVRAHRR WLELKGSGSA ASEAQIVDDI RDRDRRDAER
TASPMKPAED AYLLDTSNLS IEAAFGAAVA IIDKAMS
|
|---|
| |