| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0148 |
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| Symbol | |
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| ID | 5454902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 162854 |
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| End bp | 163798 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640875708 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_001411428 |
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| Protein GI | 154250604 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCACTCG ACGCGGACGC AATCACGGAC AGGCGACGTC TCAAGCGTCG CCTCTTTTTT
TGGCGCGCCG GCGCGATCGT CGCGGTCGCC CTCGCCCTTC TGGTGCTCGC GGCCGAAAGC
GGCATCTACC TCCCGCGCGC CCATATCGCT CGTGTGACCA TCGACGGCGT GATCGTGCAT
GATCGCTACC AGAACGAGAT GTTCAAGAAA CTCGCCGAGG ATTCCAGCGT ACGGGGGGTC
ATTCTGTCCA TCGACAGTCC GGGGGGCACG ACCACGGGCG CGGAAGCTCT CTACGAAGCC
GTTCGAGAGC TGGCTGAAAA AAAGCCGGTT GTGGCTGTGC TGGGCACTGT GGCCGCGTCG
GGGGGTTATA TTGCCGCCCT CTCCGCCGAT CACATCGTAT CGAGGGGCAA TACGATTACC
GGCTCTATCG GTGTCGTCTT TCAGTGGGCG CAGCTCGAGA AGTTGCTTGG CAATATCGGG
GTGGAAGTAC GAGAGGTGAA ATCCTCACCG CTCAAGGCTG AGCCGAGCCC CTTCCATACA
ACGAACCCCG AAGCACTGAA GGTGACCCGG GAGCTGATCG ACAGTTCGTA TGACTGGTTT
CTGCGTCTCG TCACAATACG GCGCGGGCTG GACGAAGCAA CGGCGCGGAT GGTAGGCGAC
GGGCGGGTCT ATACCGGTTG GCAGGCGGTC GAGAACGGCC TGGTAGACGA ATTAGGCGGA
GAGGACGAAG CAATCGCCTG GCTCGCGAAG GAACACAAGA TCGACGCCAG CCTGCCGGTG
AGAGACCGCA CGCCCGCTTA TCCCGATCTC GGTATGGCGA GTTTCACCGG GAAGGCACTG
GGTGAAGCGG CGGTCACGGC GATAGACGGT CTGACCGGAA AAACACAACA GACAAAAAGA
CTTACACTTG ACGGTCTGAC CAGCGTTTGG CAACCTGACC GCTAA
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| Protein sequence | MPLDADAITD RRRLKRRLFF WRAGAIVAVA LALLVLAAES GIYLPRAHIA RVTIDGVIVH
DRYQNEMFKK LAEDSSVRGV ILSIDSPGGT TTGAEALYEA VRELAEKKPV VAVLGTVAAS
GGYIAALSAD HIVSRGNTIT GSIGVVFQWA QLEKLLGNIG VEVREVKSSP LKAEPSPFHT
TNPEALKVTR ELIDSSYDWF LRLVTIRRGL DEATARMVGD GRVYTGWQAV ENGLVDELGG
EDEAIAWLAK EHKIDASLPV RDRTPAYPDL GMASFTGKAL GEAAVTAIDG LTGKTQQTKR
LTLDGLTSVW QPDR
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