Gene Plav_0147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0147 
Symbol 
ID5454050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp162448 
End bp162780 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content59% 
IMG OID640875707 
Productintegration host factor, beta subunit 
Protein accessionYP_001411427 
Protein GI154250603 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00988] integration host factor, beta subunit 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAT CCGAACTCGT CGCCCGCCTC GCACAGGCCA ATCCTCACCT CTATCAGCGC 
GACGTCGAAC GCATTGTCAG CACCATATTC GATGAAATCA GTGCTGCGCT CGCACGCGGC
GACCGGGTGG AACTTCGCGG TTTTGGCGCC TTTTCGGTAA AAAGCCGCCC CGCGCGGACG
GGCCGCAACC CGCGAACCGG TGAGCCGGTC CATGTCGATG AGAAGTCGGT GCCGTTCTTC
AAAACGGGCA AGGAACTGCG TGAGCGCCTC AATAATGCCG ACATCGCTGA CGACAAGCTT
ATGGTCGATG ATAGCGACGA CGGCGACGAC TGA
 
Protein sequence
MIKSELVARL AQANPHLYQR DVERIVSTIF DEISAALARG DRVELRGFGA FSVKSRPART 
GRNPRTGEPV HVDEKSVPFF KTGKELRERL NNADIADDKL MVDDSDDGDD