Gene Plav_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0144 
Symbol 
ID5454899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp160702 
End bp161349 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content59% 
IMG OID640875704 
Productphosphoribosylanthranilate isomerase 
Protein accessionYP_001411424 
Protein GI154250600 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCC AGGTAAAAAT TTGCGGGCTT TCCACACCGG AGACAATCGA AGCATCGGTA 
TCCGCCGGTG CGGACTATCT GGGTTTCGTA TTTTTTTCCA GAAGCCCTCG TCATTTGAGC
TATGAGCTGG CGGCCCGGCT TTCGGGATAC GTTCCCGCTT CCGTCCCCAA GGTGGCTTTG
ACGGTCGATG CCGATGACGC GATGCTCGAC GCTGTCGTAG AAGCGCTGCG GCCAGACATT
CTGCAGCTCC ATGGCGACGA AACGCCGCAA AGGCTGGTCG AAATCAAGGC ACGATACGGC
CTCACGCTCA TGAAAGCGAT CTGCGTTGCG CAGCCGGAAG ACCCTTTAAC GGCGGCTATT
TACCGAGATT CCGCCGATTT GTTGCTGTTC GATGCCAAAC CACCTAAATC TATGGCGGGC
GCATTGCCCG GCGGGAATGG CCTCGTTTTC GACTGGTCGC TGATTGCGGG CCACAGGCCG
GAGACGCCCT GGATGCTATC CGGCGGGCTC AACGCGGAGA ACGTCGCCGA AGCTGTCCGA
ATCACGGGCG CGGAAGCCGT CGATGTTTCA TCCGGTATCG AGGAAGGGCC CGGCCGGAAA
ACACCGGAAC TTATTGAAGC TTTTATCCGG GCGGCAAAGC GCGCCTGA
 
Protein sequence
MSVQVKICGL STPETIEASV SAGADYLGFV FFSRSPRHLS YELAARLSGY VPASVPKVAL 
TVDADDAMLD AVVEALRPDI LQLHGDETPQ RLVEIKARYG LTLMKAICVA QPEDPLTAAI
YRDSADLLLF DAKPPKSMAG ALPGGNGLVF DWSLIAGHRP ETPWMLSGGL NAENVAEAVR
ITGAEAVDVS SGIEEGPGRK TPELIEAFIR AAKRA