| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0143 |
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| Symbol | |
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| ID | 5455049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 159457 |
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| End bp | 160674 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640875703 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001411423 |
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| Protein GI | 154250599 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGTCA ACAAAGCTAA TTCCTTCCGC AGCGGACCCG ATGAACGGGG CCGTTTCGGT
ATTTTCGGCG GACGATTCGT TGCCGAGACG TTGATGCCGC TCGTTCTGGA ACTCGACAAG
GCCTATGCAG CGGCGAAAGC CGATCCGGCG TTCCAGGCCG AAATCGATTT CATGCAGCGC
GATTATGTCG GCCGGCCGAG CCCACTCTAT CTCGCAGCAC GCCTGACCGA GCATTTCGGC
GGGGCGAAGA TCTATTTCAA ACGCGACGAA CTCAATCACA CGGGCAGCCA CAAGATAAAC
AACTGTCTTG GCCAGATACT GCTGGCGCGG CGCATGGGGA AGACTCGCAT CATTGCGGAG
ACAGGTGCCG GGCAACATGG TGTCGCGACT GCCACCGTCT GCGCGCGTTT TGGCCTGCCC
TGCGTGATCT ACATGGGCAC CACGGACATA GAGCGGCAGA AGCCGAATGT CTTCCGCATG
AAGCTCCTCG GCGCGGAAGT CGTTCCCGTC ACGTCCGGGA CCGGCACGCT GAAAGACGCA
ATGAACGAGG CGCTGCGCGA CTGGGTGACG AATGTCGAGA ATACCTACTA CCTGATCGGC
ACCGTCGCAG GGCCACACCC CTATCCCGCC ATGGTGCGCG ACTTCCAGTC CGTGATCGGC
GAAGAGACAA AAAAGCAGAT GCTGGAGCGC GAGGGCCGGC TACCGGACTC GCTTGTCGCC
TGCATCGGTG GCGGCTCCAA CGCCATGGGC CTTTTCCATC CATTCCTCGA TGACCCTTCG
GTGAAAATAT ACGGCGTGGA AGCGGCCGGC CATGGCCTCG AAACCGGCGA GCATTGCGCC
TCTCTCAAGG GCGGCGCGCC GGGCGTGCTG CACGGCAATC GTACCTATCT GCTCCAGGAC
GATGACGGGC AGATCAAGGA TGGGCATTCG ATTTCAGCAG GTCTCGACTA TCCCGGTATT
GGCCCTGAAC ATGCGTGGCT TCACGAAACA GGCCGCGCGG AATACGTCTC CGCAACCGAT
CGGGAGGCGC TTGCCGCATT CCAGCTCTGC TCGAAACTTG AAGGCATCAT TCCGGCGCTT
GAACCGGCGC ACGCGCTCGC CTTCGTAACA AAGATCGCGT CCGCTCTTCC GAAAGATCAC
CTGATGGTGA TGAATATGTG CGGCCGTGGG GACAAGGACG TCTTCGCCGT CGCCGATCAT
CTGGGGGTAA CGCTGTGA
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| Protein sequence | MSVNKANSFR SGPDERGRFG IFGGRFVAET LMPLVLELDK AYAAAKADPA FQAEIDFMQR
DYVGRPSPLY LAARLTEHFG GAKIYFKRDE LNHTGSHKIN NCLGQILLAR RMGKTRIIAE
TGAGQHGVAT ATVCARFGLP CVIYMGTTDI ERQKPNVFRM KLLGAEVVPV TSGTGTLKDA
MNEALRDWVT NVENTYYLIG TVAGPHPYPA MVRDFQSVIG EETKKQMLER EGRLPDSLVA
CIGGGSNAMG LFHPFLDDPS VKIYGVEAAG HGLETGEHCA SLKGGAPGVL HGNRTYLLQD
DDGQIKDGHS ISAGLDYPGI GPEHAWLHET GRAEYVSATD REALAAFQLC SKLEGIIPAL
EPAHALAFVT KIASALPKDH LMVMNMCGRG DKDVFAVADH LGVTL
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