Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0142 |
Symbol | |
ID | 5455203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 158621 |
End bp | 159460 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640875702 |
Product | tryptophan synthase, alpha subunit |
Protein accession | YP_001411422 |
Protein GI | 154250598 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGACAC GGCTCGAAAA ACGGTTCGCG CAATTGAAGG GCGAGGGCCG CGCAGCCTTC ATCGCCTTCA TCACAGCAGG TGATCCGGAC TTTGAAACCT CGCTCGGGAT TCTCAAGGGG CTGCCGGCTG CGGGCGCTGA CGTGATCGAA CTGGGCATGC CCTTCACCGA TCCGATGGCG GATGGCCCTG CCGTCCAGGC GTCCACTCAG CGCGCGCTTC GCGGCGGTGC GCGCATGACA AAGACACTTG AACTCGTACA AAAATTCCGC GAGGAGAACA CGGAAACGCC GATCGTGCTG ATGGGCTATT ACAATCCCAT CTATCACATG GGTGTCGAAA ACTTTCTTGC GAAGGCCATT GATGCCGGAG TGGATGGCTT GATAGTCGTC GATCTTCCGC CGGAGGAAGA TGACGAGCTA TGCGAACCTG CGTTGAAGGC AGGATTGAAT TTCATTCGTC TGGCGACACC TACAACCGAT GACAAGAGAT TGCCCGCCGT TCTCGCCAAC ACATCGGGCT TTGTCTATTA CGTTTCGATC AACGGCATTA CCGGGTCCGC AAGTCCACAG GCGCGGAACG TGGCGGAAGC CGTGGCGCGA ATCAAACGGC ACACCTCTTT GCCGGTCGCG GTCGGCTTTG GCATTCGCAC TCCCGAGCAG GCAGCGGAAA TAGCGCGTTC AGCCGACGGA GCGGTGGTTG GTTCAGCAAT CGTAGACGCC ATCGCTCACG AACTCGACAG CAGCGGCAAG ATCAGGCCGG AGGCCGTCGA GCGAGTGCTC GGTTTTGTCC GGTCGCTGGC AGACGGCGTT CACACCGCGC GTGCGGCTAC GGCAGAATAG
|
Protein sequence | MTTRLEKRFA QLKGEGRAAF IAFITAGDPD FETSLGILKG LPAAGADVIE LGMPFTDPMA DGPAVQASTQ RALRGGARMT KTLELVQKFR EENTETPIVL MGYYNPIYHM GVENFLAKAI DAGVDGLIVV DLPPEEDDEL CEPALKAGLN FIRLATPTTD DKRLPAVLAN TSGFVYYVSI NGITGSASPQ ARNVAEAVAR IKRHTSLPVA VGFGIRTPEQ AAEIARSADG AVVGSAIVDA IAHELDSSGK IRPEAVERVL GFVRSLADGV HTARAATAE
|
| |