| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0118 |
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| Symbol | |
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| ID | 5453831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 130284 |
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| End bp | 132869 |
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| Gene Length | 2586 bp |
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| Protein Length | 861 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640875678 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001411398 |
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| Protein GI | 154250574 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.235165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.571653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCGG CGACAAGCCG GAACTTGAGG GGTTTTCTGC GCGCCGGCGG TGCGGTGCCC
GCCCTTCTGC TCGGCCTCGT GCCCGCCTCC GCCGCCGCCC AGCAGGGAGC CCCCCTCACG
GATGGCCTCG TTGAGACCCT CTCTGTCTTG GGCCTGCCCC CCGAAGCGGC CGGCGATCCG
GCGCTCGCCG CCTTCTATGC CCTTGCCGCC GGTATCGCCT TTGCCGGCTC CCTCGCCGCC
ATCACGGGCC TGCGCGCCTC CCGCGCCGCG CGCCGCGTGG CCCTGGAGCG CGAAGCAAGC
CTCGGCGTCC TTCAGGCTCG CCTCGATGCC GCCGAGGCGA TCCTCGCCGC CGAGCCCGAT
GCCGTCTTCA TCTGGACGCC GGAAACGCTC CGCGCCGCCC CCGGCACCTT CCAGGCCCGC
CCCCGCATCG TCGGCTCGAC GGCAACGCTG GTCGATCCTT CCTCGGGCGA CCTCGATTTC
AGCTACCTGC TGACGCGCCT CGAGCCTGAA AATGCCGGCC GCCTCAACAC CGCCGTGCAG
CGCCTGCGCA CGCGCGGCGC CCGCTTCTCG CTCCACGTCC AGTCGACGGA TGGCCGCACC
TTCGAGGCCG AAGGCCGTCC CGCCGGCGCG CTCGCCGTTC TCTGGCTGCG CGACGTCACG
GGCGAGCGCG CCGAGGTCTC GCGCCTGAAG GAACGTCTCC GCCAGGCGGA ATTCGCCCGT
GCCCGTTTCG AGGAACATAT CGGTTCCGCG CCATTCCCCG CCTGGCGCCG TGGCGATGAT
GGCGCGCTGG TCTGGGTGAA CGCCGCCTAT GCCCGCGCGG TCGATGCCGC CTCGCCGGAG
GATGCCGTCA CGCGCGGCCT CGAACTCCTG AACGAGGAAA CGCTCTCTTC TCTCCGCCGC
GGTCTCTTCG ATCGCTCCCG CGCCCGCGCG CGCAGCCACG CCATCATGGC GGGCGAGCGC
CGCGCCCTCG ATATCGTCGA GCAGCGTCTC GGCGATGGCG TCTCCGGCAT CGCCATCGAC
GTCTCCGATC TCGATGCCGC CGAGGCCGAG CTTCGCCGTC ACATCGAAAG CCACGCCGCC
ACGCTCGACC GCGTCACGAC GGCGGTCGCG ATCTGCGGCC CCGACAAGCG CCTCACCTTC
CGCAACCGCG CCTTTGAAAC GCTCTGGGGC CTCGATCCGC ACTGGCTCGA TGGCGGCCCC
TCCGATGGCG AGATACTGGA CGAGCTTCGC GCCCGCCGCC GCCTTCCCGA ACAGGCGAAT
TTCCAGGCGT GGAAGCAGAC GCGCATGGAA ATCTACCGGT CGACGGATCC CGTCGATGAA
TACTGGCACC TGCCCGATGG CCGCACGATC AAACTCCTCG CCCAGGCGCA TCCCTTCGGC
GGCGTCATCT ATCTTTATGA AAACGTCACC GAGCGGCTCA ATCTCGAAAG CAGCTACAAC
ACGCTCGCCC GCGTCCAGCG CGAAACCATC GACCATCTCT ATGAAGGCGT CGCCGTCTTC
GGCTCCGATG GCCGCCTGAA ACTCTACAAC CCCGCCTATG CCAACATCTG GAACCTCGCG
GACGAACAAC TCTCCGGCGA GCCGCATGTG AACGAGCTGG TCGAGATGTG CCGTCCGCTC
CTCGCCGACG AGGCCGAATG GGACACGTTG AAAAACGGCG TCACCAATAT GTCGGGCATC
CGCACCCAGA TAACGGGCCG CCTCGACCGG CCGGATGGCA CGGTGGTGGA CTACGCGCAG
GTGCCGCTGC CCGATGGCGC GACGCTGATG ACCTATGTGG ACGTGACGGA TTCGACGCGC
ATGGAACAGG CGCTGCGTGA CCGGAACGAC GCGCTCGAAA CGGCGGACCG GCTGAAATCC
GAATTCATCA GCCACGTCTC CTACCAGCTC CGCACGCCGC TCACCAATAT TCTCGGCTTC
GGCGAAATCC TCGAAACCGA AATGTTCGGC CCGCTCTCGC CGCGCCAGCA TGAATACATG
CAAGGCATCC TGGAATCTTC CGAAACGCTG ATCGACGTCG TGAACGACAT TCTCGACCTC
GCCGTCATAG AGGCGGGCGC CATGACGCTC GATCTCTCGG ATGTCGAATT GTCGGAAGTG
ATCTATGCGA CGGAGGAATT CGCGCAGCGC CCGGCACAAA AGAACAAGGT CACGCTGAGG
GTCGAGTGCC CGAAGGATAT CGGCATCGTC CGCGCCGATG AAAAGCGCAT CAAGCAGATC
ATGATAAACC TGCTCTCGAA TTCGCTCGCC TTCACGAGCC CCGGCGACAC CATCGTCATC
GGCGCCGCGC GCCGCGACAA TTCGGTCGAG CTCTATGTCG AGGATACGGG CGACGGCATC
AAGCCGGAAT TCCAGTCCAA CGTCTTCGAC CGCTTCGAGG CCCACTCCTC ATCCGACCGC
CGCCGCGGCG CCGGCCTCGG CCTCTCGCTC GTGCGTTCCT TCGTGGAGCT GCATGGCGGC
TGGGTAACGC TCGAAAGCGC CCCCGACGTC GGCACCCGCG TCACCTGCCA CCTCCCCGTC
CGCGCCGCCC CGCCGGCCGC CCAATCCTCG ACATCGCCCG TGCCGACAAA GCTGGAAGTG
GGATAG
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| Protein sequence | MKAATSRNLR GFLRAGGAVP ALLLGLVPAS AAAQQGAPLT DGLVETLSVL GLPPEAAGDP
ALAAFYALAA GIAFAGSLAA ITGLRASRAA RRVALEREAS LGVLQARLDA AEAILAAEPD
AVFIWTPETL RAAPGTFQAR PRIVGSTATL VDPSSGDLDF SYLLTRLEPE NAGRLNTAVQ
RLRTRGARFS LHVQSTDGRT FEAEGRPAGA LAVLWLRDVT GERAEVSRLK ERLRQAEFAR
ARFEEHIGSA PFPAWRRGDD GALVWVNAAY ARAVDAASPE DAVTRGLELL NEETLSSLRR
GLFDRSRARA RSHAIMAGER RALDIVEQRL GDGVSGIAID VSDLDAAEAE LRRHIESHAA
TLDRVTTAVA ICGPDKRLTF RNRAFETLWG LDPHWLDGGP SDGEILDELR ARRRLPEQAN
FQAWKQTRME IYRSTDPVDE YWHLPDGRTI KLLAQAHPFG GVIYLYENVT ERLNLESSYN
TLARVQRETI DHLYEGVAVF GSDGRLKLYN PAYANIWNLA DEQLSGEPHV NELVEMCRPL
LADEAEWDTL KNGVTNMSGI RTQITGRLDR PDGTVVDYAQ VPLPDGATLM TYVDVTDSTR
MEQALRDRND ALETADRLKS EFISHVSYQL RTPLTNILGF GEILETEMFG PLSPRQHEYM
QGILESSETL IDVVNDILDL AVIEAGAMTL DLSDVELSEV IYATEEFAQR PAQKNKVTLR
VECPKDIGIV RADEKRIKQI MINLLSNSLA FTSPGDTIVI GAARRDNSVE LYVEDTGDGI
KPEFQSNVFD RFEAHSSSDR RRGAGLGLSL VRSFVELHGG WVTLESAPDV GTRVTCHLPV
RAAPPAAQSS TSPVPTKLEV G
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