Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0117 |
Symbol | |
ID | 5454161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 128691 |
End bp | 130109 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640875677 |
Product | S-adenosyl-L-homocysteine hydrolase |
Protein accession | YP_001411397 |
Protein GI | 154250573 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0499] S-adenosylhomocysteine hydrolase |
TIGRFAM ID | [TIGR00936] adenosylhomocysteinase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00161182 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.625216 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAG CCGCCAAAGC CGATACCCAC GACTACGCCA TCAAGGACAT CAATCTCGCC GATTGGGGCC GCAAGGAGCT CGACATCGCC GAGACCGAAA TGCCCGGCCT CATGGCGACG CGCGAGGAAT ACGGCGCGAA GAAGCCGCTC AAGGGCGCGC GCATCGCCGG CTCGCTCCAC ATGACGATCC AGACCGCCGT GCTGATCGAG ACGCTGGCCG AGCTGGGTGC CGACATTCGC TGGGCGTCCT GCAACATCTA TTCGACGCAG GATCACGCCG CTGCCGCCAT CGCCGCGCGC GGCATTCCCG TCTTCGCGAT CAAGGGCGAG AGCCTTGAGG ATTACTGGGA ATACACCCAC CGCATTTTCG AATGGTCGGA TGGCGGTGCG CCCAACATGA TCCTCGACGA TGGCGGCGAC GCCACCCTCC TCATCCATCT CGGCAAGCGC GCGGAAGAGG GCGACGTCGC CTTCCTCGAA ACGCCGGGCA ATGAAGAAGA GGAAATCCTC TTCGCCGCGA TCAAGCGCCG CCTGAAGCAC AAGCCGGGCT TCTACAGCCA GATCGCGAAA AGCGTGCGCG GCGTCACCGA AGAAACGACG ACCGGCGTCC ACCGTCTTTA CGAAATGCAG AAGAAGGGCA CGCTGCTCTG GCCCGCGATC AACGTCAATG ACAGCGTCAC GAAGTCGAAA TTCGACAATC TCTATGGCTG CCGTGAATCG CTGGTGGACG GCATCCGCCG CGCCACCGAC GTCATGATGT CGGGCAAGGT CGGCGTCGTC GCCGGCTTCG GCGATGTCGG CAAGGGCTCC GCCGCCTCGC TTCGTCAGGC GGGTTGCCGC GTCATCGTCA CCGAGATCGA TCCTATCTGC GCGCTCCAGG CCGCGATGGA AGGCTATGAA GTGACGACGA TGGACGATGC CGCGCCGCGC GGCGACATCT TCGTCACGAC GACGGGCAAT GTCGACGTCA TCACCGTCGA TCACATGCGG AAAATGAAGC ACCGCGCCAT CGTCTGCAAC ATCGGTCACT TCGACAGCGA GATCCAGATC GGGGGCTTGC GCAATCTGAA GTGGCACAAT GTGAAGCCGC AGGTCGACGA GATCGAATTC CAGGACGGCA AGCGCATCAT CCTGCTCGCC GAAGGCCGCC TCGTGAATCT CGGCTGCGGC ACCGGCCATC CGAGCTTCGT CATGTCCGCC TCCTTCACCA ATCAGACGCT CGCGCAGATC GAGCTCTGGA CGAAGCCGGA CGAGTACGAA AAGAAGGTCT ACGTCCTGAA GAAGGAGCTC GACGAAAAGG TCGCGCGCCT GCATCTGGAA AAGATCGGCG TGAAGCTCGA AAAGCTGAAC AAGAAGCAGG CCGACTATAT CGGCGTCGCC GCCGAAGGCC CCTTCAAGCC GGATACCTAC CGCTACTGA
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Protein sequence | MSQAAKADTH DYAIKDINLA DWGRKELDIA ETEMPGLMAT REEYGAKKPL KGARIAGSLH MTIQTAVLIE TLAELGADIR WASCNIYSTQ DHAAAAIAAR GIPVFAIKGE SLEDYWEYTH RIFEWSDGGA PNMILDDGGD ATLLIHLGKR AEEGDVAFLE TPGNEEEEIL FAAIKRRLKH KPGFYSQIAK SVRGVTEETT TGVHRLYEMQ KKGTLLWPAI NVNDSVTKSK FDNLYGCRES LVDGIRRATD VMMSGKVGVV AGFGDVGKGS AASLRQAGCR VIVTEIDPIC ALQAAMEGYE VTTMDDAAPR GDIFVTTTGN VDVITVDHMR KMKHRAIVCN IGHFDSEIQI GGLRNLKWHN VKPQVDEIEF QDGKRIILLA EGRLVNLGCG TGHPSFVMSA SFTNQTLAQI ELWTKPDEYE KKVYVLKKEL DEKVARLHLE KIGVKLEKLN KKQADYIGVA AEGPFKPDTY RY
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