| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0110 |
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| Symbol | |
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| ID | 5455051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 121739 |
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| End bp | 123388 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640875670 |
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| Product | hypothetical protein |
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| Protein accession | YP_001411390 |
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| Protein GI | 154250566 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.12324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.549417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGGCTG GCCATAATAC AGGCGGGGGA CCGGAAAGGC GGCGAGCGGG CCGCAGCCAT
AAGAGCTTGG AACATCGGGT GCGGCGGGCG ATAACACGGC CGGACGGCCG CGCCCCGGGG
CGGGAAGCGG GCCAAAAAAG AAAATTCGGG GGACACATGC TGAAGCGCAT TCTGCTCGGG
CTCGGGGGGC TTTTCCTTCT TCTGGTGGCC ATTATCGTCG TGAGGACGCT GATGGTCCCG
GTGGTGACGC CGGGAGAAGC GGGCGCAGCC GCGACAATAG ACGCGGAACG GGCGGCGCAG
CGCCTGTCCG AAGCCGTGCA GTTCGAGACG ATTTCCCACC AGCGCGGCGC GGATGCGGCG
GCCGTCGCGC GCTCCGCCGA GGCCTTCACC GGCTTCCGCG ACTGGATGGA CGAGACCTAC
CCCGCCTTCA CCGGCGCAAC CTCGCGCGAA ATCGTCGGCG GGCACACGCT CTTCTATACG
TGGCAGGGGA GCGATGCCTC GCTCGACCCC GTCCTCATGA TGTCGCATAT CGACGTGGTG
CCGATTGCTC CGGGGACGGA GGATCAGTGG GAGCACCCGC CCTTCTCCGG CGCGATCGCG
GACGGCTATG TCTGGGGACG CGGCACGATC GACAACAAGG GCTCACTGAT CGCGATGGTC
GAGGCGGCCG AGATGCTGGC GGCGCGAGGC TTTCAGCCGG CGCGCACGAT CATGTTCGCG
TTCGGCCATG ACGAGGAAAT CGGCGGCGGC GAAGGCAACA AGGCGCTGGC CGGGCTACTG
CAGGAACGCG GCGTGCGGCT TGCCTGGGTG AAGGATGAAG GCGGCGTGAT CGGGCAAGGA
TTGCTGCCGG GCGTGAACGC GCCGGTGGCG ATGATCGGTG TGGCGGAGAA GGGATCTATC
TCGCTCGACA TCGTGGCTTA TTCGAAAGGC GGGCACTCCT CGATGCCCTC GCCCGCCGCG
CAGACCGCCA TCGGCAGGCT TGCACGCGCC ATAGAGAGGA TCGGCAACAA TCCGCTCGAA
GCACGCGTCG ACGGCGCGAC GCGCGGCATG ATCGAGGGGC TCGCACCTGC CGTGCCGTTC
ATGCAGCGGA TGGTCTATGC CAATTTGTGG CTGTTCGAGC CGGTGGTGCG CCGGGTGATG
CAGGGAAGCG AGACGAGCGC GGCGCAGCTG CAGACCACAA TCGCCCCGAC GATCATCTCG
GGCGGTGTGA AGGAAAACGT ATTGCCGCCG GAAGCGCGCG CGGTGGTGAA TTTCCGCATT
CATCCGCGCG ACACGGCCGA GAGCGTACTG GCGCATGTGC GCGAGGCGGT GGACGACCCC
GAGGTTTCGA TCGAACCGCT CGAGGGCGTG AGGGAAGCGT CGGTCGTGTC GAACATGGAG
GGCGACGGCT ACAAGCTCAT CACCCGCGTC ATCGGGGAAA GCTTCCCGGG GACGATCACG
GCGCCCTATC TGGTCGTCGG CGGCACGGAT TCCCGCCATT ACCTGCCGAT CACGGACAAT
GTGTTCCGCT TCATTCCCAT TCATATGGGG CCGGAGGACA TGGCGCGGTT CCATGGCACC
AATGAGCGGG TATCGGTGGC CAATATGGGC GAGGCGGTGG CCTTTTATAT CAGGCTGATG
GAAACGATGG ACGCGACCGA CCGGGACTGA
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| Protein sequence | MWAGHNTGGG PERRRAGRSH KSLEHRVRRA ITRPDGRAPG REAGQKRKFG GHMLKRILLG
LGGLFLLLVA IIVVRTLMVP VVTPGEAGAA ATIDAERAAQ RLSEAVQFET ISHQRGADAA
AVARSAEAFT GFRDWMDETY PAFTGATSRE IVGGHTLFYT WQGSDASLDP VLMMSHIDVV
PIAPGTEDQW EHPPFSGAIA DGYVWGRGTI DNKGSLIAMV EAAEMLAARG FQPARTIMFA
FGHDEEIGGG EGNKALAGLL QERGVRLAWV KDEGGVIGQG LLPGVNAPVA MIGVAEKGSI
SLDIVAYSKG GHSSMPSPAA QTAIGRLARA IERIGNNPLE ARVDGATRGM IEGLAPAVPF
MQRMVYANLW LFEPVVRRVM QGSETSAAQL QTTIAPTIIS GGVKENVLPP EARAVVNFRI
HPRDTAESVL AHVREAVDDP EVSIEPLEGV REASVVSNME GDGYKLITRV IGESFPGTIT
APYLVVGGTD SRHYLPITDN VFRFIPIHMG PEDMARFHGT NERVSVANMG EAVAFYIRLM
ETMDATDRD
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