| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0075 |
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| Symbol | |
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| ID | 5456374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 76765 |
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| End bp | 77478 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640875634 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001411355 |
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| Protein GI | 154250531 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.657959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.786766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGA TTTCGGCACT CTCTCTTTGT CTGGCCCTCG GCGCATGCGC CGAATATGGC
TTCGATCCAA TGACCGCCGT GTCGCCAAAG GCAAGCGAAG TCCAGTCGCT CGACAGTACG
TCGACCTCGC AGCTTTATCT GAGCGTGGTG AACGGCCTGC TCAGCCAGGG CCGCTACCGC
GCCGCGCTGG CCTATCTCGA TCAATATGCG GTGAAGGAAA AGAAGACGCC CTATTTTCAG
CAGCTCTACG GAGAGGCCCT GCTCGGCACC GAACAGTATG AGCAGGCGGG CGCCGCCTTC
GCCACACTCC GCACCACCCC CCTTGCGCCG GACGGCTTCA ATGGATTGGG CCGTGTGAAG
GCCGCTCAGG GCGATTGGCC GGGCGCCGCC GAAGAATTCG CCCGGGCCGT CGCGGCTCGC
CCGTCAAGTG CGGAATTCTT GAACAATCTA GGCTATGCGC AGCTCAGCAT CGGCGGCAGC
GAGCTTCAGG CGGCTGAATT CAATCTGCGT CAGGCGCAGG AGCTCGACCC GGCCTCCGGT
TCGATCCGCA ACAATTTGCT CATCGCGCTG ATGATGGCGG GAAAGGACGC GGAGGCGCGC
CGCCTGCTCG CAGGCATTCC CGCATCGCGC GAGCGTGCCG AGGTTCGTGA TTTTGCCGCG
TCCTGGGTCA GGAACCATCA GCCTGCGGGC GGCGAGGCCA GGGAGGATAT GTAA
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| Protein sequence | MKRISALSLC LALGACAEYG FDPMTAVSPK ASEVQSLDST STSQLYLSVV NGLLSQGRYR
AALAYLDQYA VKEKKTPYFQ QLYGEALLGT EQYEQAGAAF ATLRTTPLAP DGFNGLGRVK
AAQGDWPGAA EEFARAVAAR PSSAEFLNNL GYAQLSIGGS ELQAAEFNLR QAQELDPASG
SIRNNLLIAL MMAGKDAEAR RLLAGIPASR ERAEVRDFAA SWVRNHQPAG GEAREDM
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