| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0068 |
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| Symbol | |
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| ID | 5454363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 67908 |
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| End bp | 69587 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640875627 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001411348 |
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| Protein GI | 154250524 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.503427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTTCC GGAAAAAAAT CAATTTTCTT GTCACGGCTT CGGTCCTTGC CATGGTTGCC
CATCCGGCAC TTGCGCAGGG CGTTCCCCCC CTTTCGGCGC CTTCGCCCGG TACGGTTCTT
TCGCCGCCGC CCCCCTCGCC GGAACTGCAA AGGCGAGAAG TGCCGGAATT GCGCGAGGAT
CTGGGACTGC CGGACGGATC GGAGAAGGTG CTCAACTTCC GCGTATCGAG CGTTCGGGTG
GTGGGCGCAA CAGTGATCGA TGAAAAGGTT CTTTCCGCGC AGTTCGACCC CTTGCTCAAC
CGCCAGATTA CCGCGGCCGA CCTTCGCAGC GCCCTCGACA GAACCAACGC GCTTTATACC
GAGGCAGGCT ATGCGCTTGG CCGGGCCTTT GTTCCCGTGC AGGTTCTCCA GGGCGGCGTG
CTGATCGTCC GCGTCGTGGA AGGCTATATC GGCGAGATTC AGATCGACGC GGCGGACCCC
GCCGTACGGA AAATGGTCGA GGGGTTCAGC CGGCGGATCG TCGCGGAGCA ACCTCTTCGC
ACAGCGTCTC TTGAGCGCTA TCTGTTGCTG ATCAGCGATA TTCCGGGCGT GACGCTTGGT
GGCCAGCTGC AGTCGATGGA TGTCTATTCG GGTGCCGCCA CTCTCGCCCT CAAGGTCGAA
AGCAAGAAGT TCACCGTCTC GTCGGCGGTC GACAACAGGG CCAATCTGGA CGACGCACCG
TTTCAGGCCT ATCTGACCGG CGCACTGAAC AACATCTTCG GCTTTGGCGA CGAGGTTTCC
ATCACGGGTC TCGCCACGCC GGAGCTTGAA TCGCAGCAGT ATTTCCGCGG CGCTTTCTCG
ACCTTTATCG GAACCGATGG CCTGCGGGCT TCCGTCGGCG CGGCCTACGC CAAATCGGAA
GCGGCCGACA TGCCGCCCGG CATCGAACTC ATCAGCACCA GCACACAGGT CGATTTCCTG
ATGAGCTATC CGATCATCCG CGCGACCGCT CAGACCCTCA CTGCCTTTTT CGGGGCCTAC
ATCACGGACG CGGAGAACGA ACTCAACGGC TTCACCTTCA GCAAGGATGC GATCCGGGCC
GCGCATATCG GGGGCAGCTA TGTCGCGAAG CTCGACGAGC GCACCTCGCT CAGTTCGCAT
ATGCGCGTGA CGCAGGGATT TTCGATATGG GATGCGGGGC CGGAGAACAC GCTGCACTCG
CGGCTCGGCG CCACAGCCAA TTTCACGAAG CTGCAGAGCG GCGCGAGCCT CGCTTACGCC
GCAACCGAGC GGCTTTTACT GAGCTTCCGC GTCGAAGGCC AGTACAGCCC GGACTCTCTG
TTCAGCTCCG AGGAGATCAG CTTCGGCGGC GCGCGGTTTG CGCGCGGCTA CAACAACTCC
GAGATTTCCG GCGATAGCGG CCTCGGCGCT TCGGTTCAGG CGAGCTACCG CTTCGATGTC
GACCTGTTCG GCGGCTGGTC GGTAACGCCC TACACGTTCC TCGATCATTC GCAGGTGTGG
AACACGGATG TGGACCGGCA AGGCGATGCG CGACTGCTCT CCACCGGCAT CGGCGTCACG
CTTTCCAACC GCCGCTGGCT GTCGGTCGGT CTTGAGCTCG ACAAGCCGAT AAACCGCACC
CCGATCTCGC AAGACAACAA GGACCCCCGG CTTTTCGTCT CGTTCGAAGT CCGGTTCTGA
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| Protein sequence | MMFRKKINFL VTASVLAMVA HPALAQGVPP LSAPSPGTVL SPPPPSPELQ RREVPELRED
LGLPDGSEKV LNFRVSSVRV VGATVIDEKV LSAQFDPLLN RQITAADLRS ALDRTNALYT
EAGYALGRAF VPVQVLQGGV LIVRVVEGYI GEIQIDAADP AVRKMVEGFS RRIVAEQPLR
TASLERYLLL ISDIPGVTLG GQLQSMDVYS GAATLALKVE SKKFTVSSAV DNRANLDDAP
FQAYLTGALN NIFGFGDEVS ITGLATPELE SQQYFRGAFS TFIGTDGLRA SVGAAYAKSE
AADMPPGIEL ISTSTQVDFL MSYPIIRATA QTLTAFFGAY ITDAENELNG FTFSKDAIRA
AHIGGSYVAK LDERTSLSSH MRVTQGFSIW DAGPENTLHS RLGATANFTK LQSGASLAYA
ATERLLLSFR VEGQYSPDSL FSSEEISFGG ARFARGYNNS EISGDSGLGA SVQASYRFDV
DLFGGWSVTP YTFLDHSQVW NTDVDRQGDA RLLSTGIGVT LSNRRWLSVG LELDKPINRT
PISQDNKDPR LFVSFEVRF
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