| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0066 |
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| Symbol | |
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| ID | 5453877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 64830 |
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| End bp | 66530 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640875625 |
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| Product | hypothetical protein |
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| Protein accession | YP_001411346 |
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| Protein GI | 154250522 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4655] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.796448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGAGGA GAAAGATGCC GCTTTCACTG ACAGGGCTTC TCGGCCGCTA CAGGCGCGAC
GAGCGGGGCG TCATTTCGGT GATGGCGGTC GGCGCGTTGT TCCTCGTTCT CGCGGTCGCC
ATGGTCGTGA TCGACACCGG CTCGATGCTC TATGCGCGGC GCGATCTTCA GGCGGCAACG
GACGCGGCGG CTCTCGGCGC CGTGCGGCAG ATCGGCAATG CGGAGAACGC CGCCCGCTCC
ATTCTCGATC TCAATGGCTA TTCCCCCGGC GACGCGCCAC AAGTCGTCAC CGGCATCTAC
AGCGCCGATC CCTCGCTCGC TCCCCGCGAC AGATTTGTCG AAGCGGACGG CGCCACCGAG
GCTTCACAGA TCAACGCCGT GCGTGTCATC AAATATGCCG AGGCGCCGAC ATATTTTGCG
AGCCTGTTCG GGTTCGAAAA CCTGACGCGG ATCAACGCGG TTTCCACTGC CGCCTACACC
AAGACCGTTT CCTTTTCGGC GGGTACGCGC GTTGCCGAGC TGAACAGCGG CTTGGCCAAT
CAACTGCTCG GAGGCCTTCT GGGAACGACG CTGAACCTCT CCCTCGTCGA CTATAACGGG
CTCGCGAATG CAAATATCGA CGCGTTGATG TTTCTGGACG CACTTGCTAC GCAGGTTGGC
CTGGAGGCCG GGTCCGACAC CTATGGCGAT TTGCTGAGTG GCAACGCAAC GGTTGCCGAT
CTGGTGCGCG CCGCCGTCGA TGTGCTCAAC AGCGAAACTT TCGACGGAAA TCCGGCGGTT
GCACGGGGCG CCCTCGAGGC AGCCCTCAAT CCCGCCGGAA ATATTTCCGT GCCATTGAAC
GACATCCTGA ACGCCACGCC TTTCCTTAAC CGGACCATTG GATCCGTTGC CTCAGGCGCC
AGCGAGGGGC AGAGCTTCAA TCTGCTGGAT CTTGTCTCCG GCACGGCCAT GGTCCTCGGC
CAGGGGAATG CCGTGAACTT CAATGTCGCC GGCGGCGTGC CGCCCCTCGC CTCCGTCTCC
GGTTCCGTTA CGGTTGGTGA GCCGATGGCG CGGATGGCCG TAGGAACGGT TGGGGATTTC
GTGCGGACGT CGCAGGTGAC TATTCAGCTG GATGCGTATA TCGACACCGG CATTACGCTG
CTGGCGGACG CCCGCGTCAG GGTTCCGATC CACATCAGCA TGGCTGAGGG GACAGCTACC
GTGTCCAACA TTCCGTGTAC GGAGGCTGGA ACAATGACGG CGCTGGAAGG CATGACCGGT
ACTCTCGCGG CTCGCTACGG CACAATGGCA AACTCGACGC CCACAATCGC GACCATTCGC
CTTAACGTGC CTCTCCTCGG GAATGTTAAC GTCATCGATC TCACAGCCAG CGGGTCTTAT
CCGGTCGGCA GCAGCACCCA GGTAGTGAAC TTCACGCAGA TAGATGTCGA AAACCAGTCT
GTGCGAACCG TATCCGCCGA TACGGCAGTA TTCTCCGGTC TCGCCGGTGC CCTTCAGATC
GGGCAAGTTG TTTTGCTGGG TGGAATTCCG GTGCCGGGGC TTGCGGGACT GCTGACAACT
ATTCTGTCTG CAGTTGGCAA TGGACTGGCG GTCCTCGACC CGATCATCAG CTCCCTGCTG
ACCACACTCG GCATAAAACT CGGCGTCATG GACATGACTG TTCACGGCGT TCGCTGCAAT
TCGCCGACGC TGGTGCTCTA G
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| Protein sequence | MRRRKMPLSL TGLLGRYRRD ERGVISVMAV GALFLVLAVA MVVIDTGSML YARRDLQAAT
DAAALGAVRQ IGNAENAARS ILDLNGYSPG DAPQVVTGIY SADPSLAPRD RFVEADGATE
ASQINAVRVI KYAEAPTYFA SLFGFENLTR INAVSTAAYT KTVSFSAGTR VAELNSGLAN
QLLGGLLGTT LNLSLVDYNG LANANIDALM FLDALATQVG LEAGSDTYGD LLSGNATVAD
LVRAAVDVLN SETFDGNPAV ARGALEAALN PAGNISVPLN DILNATPFLN RTIGSVASGA
SEGQSFNLLD LVSGTAMVLG QGNAVNFNVA GGVPPLASVS GSVTVGEPMA RMAVGTVGDF
VRTSQVTIQL DAYIDTGITL LADARVRVPI HISMAEGTAT VSNIPCTEAG TMTALEGMTG
TLAARYGTMA NSTPTIATIR LNVPLLGNVN VIDLTASGSY PVGSSTQVVN FTQIDVENQS
VRTVSADTAV FSGLAGALQI GQVVLLGGIP VPGLAGLLTT ILSAVGNGLA VLDPIISSLL
TTLGIKLGVM DMTVHGVRCN SPTLVL
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