Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0058 |
Symbol | |
ID | 5453969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 60579 |
End bp | 61100 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640875617 |
Product | MgtC/SapB transporter |
Protein accession | YP_001411338 |
Protein GI | 154250514 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.460783 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCG GCTATCTTTT TGAGACCTAC GGCGCGCTCG ACTATCTCGC GCGTCTGGGG GCTGCGGCGG CGATGGGCGG TGTCATCGGC CTCGACCGCG AGGCGCATGA CCGCCCGGCT GGCCTCCGCA CGCATATGAT GACGGCGATG GCCGCCGCGA TCTTCACCAT TCTCACACTT GAACTCCATG AAGAGTTCGT GCTGCGCGGT GCGCATGGCA CCGCCGACCC GATCCGCATC ATCGATGCGG TGACGGCCGG CGTCGCCTTC CTCGCGGCAG GCGCCATCAT CCATATGCGC GGCCAGGTGC GCGGCCTCAC CACCGGCGCG GGAATGTGGC TTGCCGGCGC GCTGGGCGTC GCGTGCGGCA TGGAAAAATA CATGCTTGGC GGGGTAGCCC TGGCGCTCGC CGCCATCGTT CTCATGGCTT TGCGTCCTCT CGAAGCGCGC CTGAGCCATC GCCGGGGGAA TGCGCGGGAA AATGAAGACC AGGCGGAACG GGATGACGCC CCTCCCCGGT AG
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Protein sequence | MDIGYLFETY GALDYLARLG AAAAMGGVIG LDREAHDRPA GLRTHMMTAM AAAIFTILTL ELHEEFVLRG AHGTADPIRI IDAVTAGVAF LAAGAIIHMR GQVRGLTTGA GMWLAGALGV ACGMEKYMLG GVALALAAIV LMALRPLEAR LSHRRGNARE NEDQAERDDA PPR
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