| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0053 |
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| Symbol | |
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| ID | 5455453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 58670 |
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| End bp | 59275 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640875612 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001411333 |
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| Protein GI | 154250509 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.524534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGACG AAAAAGAAGA GCAGCTGCCA GAGCCGCTGA GCGACGCTGA GTTCAAGAAA
GAACTCGAGC AGTTGATCCC GCATCTTCGT GCCTTCGCCC GCAACCTTTG CGGCAAGCCG
GATATGGCGG ACGATCTGGC GCAGGATGCG CTCTTGAAGG CGTGGGGTGC GCGAAAGAGA
TATCGCGCTG GTACCAATAT GCGCGCTTGG GCATTCGTGA TCCTGCGCAA CCAGTTCCTT
TCTCAAATGC GCCGGTCCCG ATTTACAGGC GAGTGGGACG ACAGTGTTGC CGAACGCAAA
CTCGCCACGC CCGCGCATCA GGACCACCAG ATGCAGCTTT CAGATTTGCA GCGGGCGCTG
ATGCGTTTGC CTGCCGCCCA GCGCGAGGCG CTTATTCTCG TAGGCGCCGG CGGCTTCTCC
TATGAAGAGG CCGCCGATAT CTGCGACTGC GCAGTGGGCA CGGTGAAAAG CCGCGTTGCG
CGGGCACGCG TCGCGCTGGA AGAGATGATC GATGGCGGGG TTTTACCCGC ACGGGCAGAG
AGCATGCTTA CGGCAGGCGA GACGACGGAT GCGATCATGA GCGCGATGGA CAAGCTCACG
CGATAA
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| Protein sequence | MKDEKEEQLP EPLSDAEFKK ELEQLIPHLR AFARNLCGKP DMADDLAQDA LLKAWGARKR
YRAGTNMRAW AFVILRNQFL SQMRRSRFTG EWDDSVAERK LATPAHQDHQ MQLSDLQRAL
MRLPAAQREA LILVGAGGFS YEEAADICDC AVGTVKSRVA RARVALEEMI DGGVLPARAE
SMLTAGETTD AIMSAMDKLT R
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