| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0045 |
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| Symbol | |
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| ID | 5455890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 47696 |
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| End bp | 49030 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640875604 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001411325 |
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| Protein GI | 154250501 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0327786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACC GTGTGGACGC CGCGGGCGGC GCCGCCACCG GCGTTGCGCC GTCGGCAGGC
TTCACGCCCG CCTACCGGAA CTATGCCCTC TTTATACTGA TGGTCGCCTA CACGGCGAAT
TACGTCGACA GGCAGATCCT CGCGATCCTG CTGGAGCCGA TCAAGCAGGA TCTCGGCCTC
AACGACACGC AGCTCGGTTT CCTCTCCGGC ATCACCTTCG CGATTTTCTA CGCAACGCTC
GGCGTTCCGA TCGCCATGTG GGCGGACCGC ACGAACCGGC GCAATATCGT GGCGCTCGCG
CTCACCATCT TCTCCAGCAT GACGGTGGTC TGCGGCTTCG TCACCAACTT CGCGCAGCTC
GCGCTGGCGC GTATCGGCGT CGGCATCGGC GAGGCCGGGT CGAGCCCGCC TTCCCATTCC
ATGATCTCCG ACATGTTCCC GCCGGAAAAG CGCGCAAGCG CCATGGGCAT TTATTCGCTC
GGCATCAATA TCGGCATTCT CATCGGCTTC CTCGTCGGCG GCTGGGTCAG CCAGTGGTAT
GGCTGGCGCG CGGCCTTCTT CATTGTCGGC GCGCCGGGCC TCCTCATCGC GCTCCTCGTC
CGCTTCACCT TGAAGGAGCC TGAGCGCGGC CATGCGGATG GCATCGCCTC GCAGGCATCG
GCCGCCGCGC CCAAGGTCAT GGAAGTCTGG AAGCTGCTCT GGTCGCAGCG TTCCTTCCGG
CACATTTCCA TTGGCTGCGC GCTCGCCGCC TTCGGCGGCT ATGCGGGCGT CACCTGGATA
CCTGCCTTCC TGATGCGCTC CTTCCAGATG TCGCCGGGCG AAATCGGCAC CTGGCTCGCG
CTCATCATCG GCTTTGTCGG CGGTGCGGGC ACCTATCTCA CAAGCTGGCT TGCCGATCGT
TATGGCAAGG GCGATGTGCG CTGGAACATG TGGGTGGTCG CCATCGTCAT GCTGGTCTGC
TTCCCCTTCG CGGTCGGCAT GTATCTGTCG ATGGACAAAT ACTGGGCACT GGCCTTCTTC
CTTGTGCCGG CCTTCGCGGG CGCGGCCTAT ATCGGGCCGA GCCTCGCCAT GACGCAGGGC
CTCGTCACCC TGCGCATGCG GGCCGTCGCC TCGGCGGTGC TGTTCCTGAT CCTGAACCTC
ATCGGCATGG GCCTCGGGCC GCAGGCCGTG GGCATCGTCA GCGATCTCTA CAATCCGCTC
TACGGCGCGG AATCGCTCCG CTACGCGCTC CTCACCGTCA TGGTGGTCTG GCCCTGGGCA
GCGGTGCATT TCGTGCTGGC GGCAAAAACG CTGAAGGAAG ACCTCGCCCG CGCCAAGGCG
CATAGCCTGA GATAG
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| Protein sequence | MTDRVDAAGG AATGVAPSAG FTPAYRNYAL FILMVAYTAN YVDRQILAIL LEPIKQDLGL
NDTQLGFLSG ITFAIFYATL GVPIAMWADR TNRRNIVALA LTIFSSMTVV CGFVTNFAQL
ALARIGVGIG EAGSSPPSHS MISDMFPPEK RASAMGIYSL GINIGILIGF LVGGWVSQWY
GWRAAFFIVG APGLLIALLV RFTLKEPERG HADGIASQAS AAAPKVMEVW KLLWSQRSFR
HISIGCALAA FGGYAGVTWI PAFLMRSFQM SPGEIGTWLA LIIGFVGGAG TYLTSWLADR
YGKGDVRWNM WVVAIVMLVC FPFAVGMYLS MDKYWALAFF LVPAFAGAAY IGPSLAMTQG
LVTLRMRAVA SAVLFLILNL IGMGLGPQAV GIVSDLYNPL YGAESLRYAL LTVMVVWPWA
AVHFVLAAKT LKEDLARAKA HSLR
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