Gene Plav_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0037 
Symbol 
ID5455340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp41259 
End bp41918 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content67% 
IMG OID640875596 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_001411317 
Protein GI154250493 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTATTG AAATCGCAGG GATACTGGGC GCGGCCGATC TCAGGCTCGC CGATACGGTT 
TTCGCGCAAA AAGACGCTTT CGAGAGCGGC GCGCGGACGG CCGGACGGAT TGCCAGGGCC
GTCAAGAATA ATGAGCAGGC GAAGCCCGCC GGCCTTGCCG CCGACCTGAC CATGCTGGTC
GAGAAGCGGC TGATGAAGAA CGACGTCTTC CGGGCGGCGG CGCGACCGCG AAACTTCATC
CGCATCCTGC TCTCCCGCTA CACGCAAGGC ATGGCTTACG GCCTGCATTC GGACGATGCC
TTCATGGAGC GCCAGCGGGT CGACCTTTCC TTCACGCTTT TCCTTTCTCC GCCAGAGAGT
TACGAGGGGG GCGAGCTGAT CGTGGAGGAG CCCGCGGGCG AGCGGCTGGT GAAGCTCGAA
GCGGGGTCGC TGGTGCTCTA CCCCTCGGCG ACGCTGCACC GGGTGGCGGA AGTGACCAGC
GGCGAGCGGC GGGCCGCCGT GGGCTGGATC CGGAGCCTTG TCAGGAGCGC CGAGGACCGC
GAAACGCTCT TCGACGTGGC GCTGGCGCTG CGTCAGGCGG AGGCGGCGGG CGACCGGGCG
CTGACAGACC GGCTGCTCAA GATACAGGGC TCGCTGCTTC GGCGCTGGGG CGAGGATTAG
 
Protein sequence
MFIEIAGILG AADLRLADTV FAQKDAFESG ARTAGRIARA VKNNEQAKPA GLAADLTMLV 
EKRLMKNDVF RAAARPRNFI RILLSRYTQG MAYGLHSDDA FMERQRVDLS FTLFLSPPES
YEGGELIVEE PAGERLVKLE AGSLVLYPSA TLHRVAEVTS GERRAAVGWI RSLVRSAEDR
ETLFDVALAL RQAEAAGDRA LTDRLLKIQG SLLRRWGED